Difference between revisions of "SJ10125"

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(Created page with "Category:Gene == Gene SJ10125 == * right end position: ** 283367 * transcription direction: ** POSITIVE * left end position: ** 276759 * centisome position: ** 69.70083...")
 
 
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[[Category:Gene]]
 
[[Category:Gene]]
 
== Gene SJ10125 ==
 
== Gene SJ10125 ==
−
* right end position:
 
−
** 283367
 
 
* transcription direction:
 
* transcription direction:
 
** POSITIVE
 
** POSITIVE
 +
* right end position:
 +
** 283367
 
* left end position:
 
* left end position:
 
** 276759
 
** 276759
Line 43: Line 43:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[DADPKIN-RXN]]
 
* Reaction: [[DADPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Reaction: [[DCDPKIN-RXN]]
 
* Reaction: [[DCDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Reaction: [[DGDPKIN-RXN]]
 
* Reaction: [[DGDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[DTDPKIN-RXN]]
 
* Reaction: [[DTDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[DUDPKIN-RXN]]
 
* Reaction: [[DUDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[GDPKIN-RXN]]
 
* Reaction: [[GDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[NDPK]]
 
* Reaction: [[NDPK]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
Line 88: Line 88:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14228]]
 
* Reaction: [[RXN-14228]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Reaction: [[UDPKIN-RXN]]
 
* Reaction: [[UDPKIN-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
== Pathways associated ==
 
== Pathways associated ==
 +
* [[PWY-6545]]
 +
* [[PWY-7176]]
 
* [[PWY-7210]]
 
* [[PWY-7210]]
−
* [[PWY-7198]]
 
−
* [[PWY-7176]]
 
−
* [[PWY-7220]]
 
 
* [[PWY-7184]]
 
* [[PWY-7184]]
−
* [[PWY-7222]]
+
* [[PPGPPMET-PWY]]
 +
* [[PWY-7198]]
 
* [[PWY-7205]]
 
* [[PWY-7205]]
−
* [[PWY-7224]]
 
 
* [[PWY-7197]]
 
* [[PWY-7197]]
−
* [[PWY0-166]]
 
−
* [[PWY-7227]]
 
−
* [[PPGPPMET-PWY]]
 
 
* [[PWY-7226]]
 
* [[PWY-7226]]
−
* [[PWY-7221]]
+
* [[PWY-7220]]
−
* [[PWY-6545]]
+
* [[PWY0-166]]
 +
* [[PWY-7222]]
 
* [[PWY-7187]]
 
* [[PWY-7187]]
 +
* [[PWY-7221]]
 +
* [[PWY-7227]]
 +
* [[PWY-7224]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=283367}}
 
 
{{#set: transcription direction=POSITIVE}}
 
{{#set: transcription direction=POSITIVE}}
 +
{{#set: right end position=283367}}
 
{{#set: left end position=276759}}
 
{{#set: left end position=276759}}
 
{{#set: centisome position=69.70083    }}
 
{{#set: centisome position=69.70083    }}
 
{{#set: reaction associated=ATCD|ATCDm|ATDCD|ATDCDm|ATDGD|ATDTD|ATDTDm|ATDUD|ATDUDm|ATGD|ATID|ATIDm|ATUD|ATUDm|CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NDPK|NDPKm|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
 
{{#set: reaction associated=ATCD|ATCDm|ATDCD|ATDCDm|ATDGD|ATDTD|ATDTDm|ATDUD|ATDUDm|ATGD|ATID|ATIDm|ATUD|ATUDm|CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NDPK|NDPKm|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
−
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
+
{{#set: pathway associated=PWY-6545|PWY-7176|PWY-7210|PWY-7184|PPGPPMET-PWY|PWY-7198|PWY-7205|PWY-7197|PWY-7226|PWY-7220|PWY0-166|PWY-7222|PWY-7187|PWY-7221|PWY-7227|PWY-7224}}

Latest revision as of 13:56, 10 January 2019

Gene SJ10125

  • transcription direction:
    • POSITIVE
  • right end position:
    • 283367
  • left end position:
    • 276759
  • centisome position:
    • 69.70083
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=SJ10125&oldid=19964"