Difference between revisions of "AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN] == * direction: **...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.q EC-4.1.1.q]
 
* common name:
 
* common name:
 
** tryptophan decarboxylase
 
** tryptophan decarboxylase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/4.1.1.28 EC-4.1.1.28]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TRP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TRYPTAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TRYPTAMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-tryptophan[c] '''+''' 1 H+[c] '''=>''' 1 tryptamine[c] '''+''' 1 CO2[c]
+
** 1 H+[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 CO2[c] '''+''' 1 tryptamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
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*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5877]], beta-carboline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5877 PWY-5877]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 
** '''5''' reactions found over '''13''' reactions in the full pathway
 
** '''5''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-5473]], hydroxycinnamic acid serotonin amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5473 PWY-5473]
+
* [[PWY-7936]], psilocybin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7936 PWY-7936]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
 
* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
 
** '''2''' reactions found over '''13''' reactions in the full pathway
 
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5473]], hydroxycinnamic acid serotonin amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5473 PWY-5473]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-3181]], L-tryptophan degradation VI (via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3181 PWY-3181]
 
* [[PWY-3181]], L-tryptophan degradation VI (via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3181 PWY-3181]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
 
* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5877]], beta-carboline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5877 PWY-5877]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30339 30339]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30340 30340]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00685 R00685]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00685 R00685]
Line 56: Line 58:
 
** [http://www.uniprot.org/uniprot/P34751 P34751]
 
** [http://www.uniprot.org/uniprot/P34751 P34751]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.1.q}}
 
{{#set: common name=tryptophan decarboxylase}}
 
{{#set: common name=tryptophan decarboxylase}}
−
{{#set: ec number=EC-4.1.1.28}}
 
 
{{#set: gene associated=SJ11952}}
 
{{#set: gene associated=SJ11952}}
−
{{#set: in pathway=PWY-581|PWY-5473|PWY-5290|PWY-3181|PWY-6326|PWY-6307|PWY-5877}}
+
{{#set: in pathway=PWY-5877|PWY-581|PWY-7936|PWY-5290|PWY-5473|PWY-6307|PWY-3181|PWY-6326}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:02, 10 January 2019

Reaction AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • tryptophan decarboxylase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5877, beta-carboline biosynthesis: PWY-5877
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-581, indole-3-acetate biosynthesis II: PWY-581
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-7936, psilocybin biosynthesis: PWY-7936
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5290, secologanin and strictosidine biosynthesis: PWY-5290
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-5473, hydroxycinnamic acid serotonin amides biosynthesis: PWY-5473
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6307, L-tryptophan degradation X (mammalian, via tryptamine): PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-3181, L-tryptophan degradation VI (via tryptamine): PWY-3181
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6326, camptothecin biosynthesis: PWY-6326
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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