Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERILEU-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** REVERSI...")
 
 
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* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** isoleucine transaminase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 +
* common name:
 +
** isoleucine transaminase
 
* Synonym(s):
 
* Synonym(s):
  
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ06412]]
+
* Gene: [[SJ17677]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ04586]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ06412]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ17677]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ13018]]
 
* Gene: [[SJ13018]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ04586]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-nannochloropsis_salina]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
 
* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
 
* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
 
* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 61: Line 61:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24804 24804]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
Line 73: Line 73:
 
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=isoleucine transaminase}}
 
 
{{#set: ec number=EC-2.6.1.42}}
 
{{#set: ec number=EC-2.6.1.42}}
−
{{#set: gene associated=SJ06412|SJ17677|SJ13018|SJ04586}}
+
{{#set: common name=isoleucine transaminase}}
−
{{#set: in pathway=ILEUSYN-PWY|ILEUDEG-PWY|PWY-5108|PWY-5103|PWY-5101|PWY-5078|PWY-5104}}
+
{{#set: gene associated=SJ17677|SJ04586|SJ06412|SJ13018}}
 +
{{#set: in pathway=PWY-5101|PWY-5108|PWY-5078|PWY-5104|PWY-5103|ILEUDEG-PWY|ILEUSYN-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:06, 10 January 2019

Reaction BRANCHED-CHAINAMINOTRANSFERILEU-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • isoleucine transaminase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5108, L-isoleucine biosynthesis V: PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5078, L-isoleucine degradation II: PWY-5078
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 3 reactions found over 7 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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