Difference between revisions of "RXN-10828"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10828 RXN-10828] == * direction: ** LEFT-TO-RIGHT * common name: ** carboxyphosphinopyruvate de...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.7.8.23 EC-2.7.8.23] | ** [http://enzyme.expasy.org/EC/2.7.8.23 EC-2.7.8.23] | ||
| + | * common name: | ||
| + | ** carboxyphosphinopyruvate decarboxylase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 13: | Line 13: | ||
** 1 [[CPD-11740]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] | ** 1 [[CPD-11740]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] | ||
* With common name(s): | * With common name(s): | ||
| − | ** 1 carboxyphosphinopyruvate[c] '''+''' 1 H+[c] '''=>''' 1 | + | ** 1 carboxyphosphinopyruvate[c] '''+''' 1 H+[c] '''=>''' 1 3-(hydroxyphosphinoyl)pyruvate[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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* Gene: [[SJ02830]] | * Gene: [[SJ02830]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ05932]] | * Gene: [[SJ05932]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ05933]] | * Gene: [[SJ05933]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[SJ05283]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-7769]], phosalacine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7769 PWY-7769] | * [[PWY-7769]], phosalacine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7769 PWY-7769] | ||
| + | ** '''2''' reactions found over '''25''' reactions in the full pathway | ||
| + | * [[PWY-6322]], phosphinothricin tripeptide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6322 PWY-6322] | ||
** '''2''' reactions found over '''25''' reactions in the full pathway | ** '''2''' reactions found over '''25''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 44: | Line 44: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R08869 R08869] | ** [http://www.genome.jp/dbget-bin/www_bget?R08869 R08869] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.7.8.23}} | {{#set: ec number=EC-2.7.8.23}} | ||
| − | {{#set: gene associated=SJ02830 | + | {{#set: common name=carboxyphosphinopyruvate decarboxylase}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=SJ02830|SJ05932|SJ05933|SJ05283}} |
| + | {{#set: in pathway=PWY-7769|PWY-6322}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 14:10, 10 January 2019
Contents
Reaction RXN-10828
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- carboxyphosphinopyruvate decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-11740[c] + 1 PROTON[c] => 1 3-HYDROHYDROXYPHOSPHORYLPYRUVATE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 carboxyphosphinopyruvate[c] + 1 H+[c] => 1 3-(hydroxyphosphinoyl)pyruvate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ02830
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ05932
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05933
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05283
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7769, phosalacine biosynthesis: PWY-7769
- 2 reactions found over 25 reactions in the full pathway
- PWY-6322, phosphinothricin tripeptide biosynthesis: PWY-6322
- 2 reactions found over 25 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
