Difference between revisions of "THYMIDYLATESYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYMIDYLATESYN-RXN THYMIDYLATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidyla...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
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* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.1.1.45 EC-2.1.1.45] | ** [http://enzyme.expasy.org/EC/2.1.1.45 EC-2.1.1.45] | ||
+ | * common name: | ||
+ | ** thymidylate synthase | ||
* Synonym(s): | * Synonym(s): | ||
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] | * [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] | ||
** '''8''' reactions found over '''8''' reactions in the full pathway | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198] | * [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198] | ||
** '''6''' reactions found over '''7''' reactions in the full pathway | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-7199]], pyrimidine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199] | * [[PWY-7199]], pyrimidine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199] | ||
** '''2''' reactions found over '''5''' reactions in the full pathway | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
− | |||
− | |||
− | |||
− | |||
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] | * [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] | ||
** '''6''' reactions found over '''7''' reactions in the full pathway | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] | ||
** '''14''' reactions found over '''17''' reactions in the full pathway | ** '''14''' reactions found over '''17''' reactions in the full pathway | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 47: | Line 47: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12105 12105] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R02101 R02101] | ** [http://www.genome.jp/dbget-bin/www_bget?R02101 R02101] | ||
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** [http://www.uniprot.org/uniprot/P13100 P13100] | ** [http://www.uniprot.org/uniprot/P13100 P13100] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-2.1.1.45}} | {{#set: ec number=EC-2.1.1.45}} | ||
+ | {{#set: common name=thymidylate synthase}} | ||
{{#set: gene associated=SJ19601}} | {{#set: gene associated=SJ19601}} | ||
− | {{#set: in pathway=PWY-7210|PWY- | + | {{#set: in pathway=PWY-7210|PWY-7184|PWY-3841|PWY-7198|1CMET2-PWY|PWY-7199|PWY-7187|PWY0-166}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 14:14, 10 January 2019
Contents
Reaction THYMIDYLATESYN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- thymidylate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 METHYLENE-THF-GLU-N[c] + 1 DUMP[c] => 1 TMP[c] + 1 DIHYDROFOLATE-GLU-N[c]
- With common name(s):
- 1 a 5,10-methylene-tetrahydrofolate[c] + 1 dUMP[c] => 1 dTMP[c] + 1 a 7,8-dihydrofolate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ19601
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-3841, folate transformations II: PWY-3841
- 9 reactions found over 11 reactions in the full pathway
- PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-7199, pyrimidine deoxyribonucleosides salvage: PWY-7199
- 2 reactions found over 5 reactions in the full pathway
- PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
- 6 reactions found over 7 reactions in the full pathway
- PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
- 14 reactions found over 17 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: