Difference between revisions of "TREHALOSEPHOSPHA-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** treha...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** trehalose-6-phosphate phosphatase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
 
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
 +
* common name:
 +
** trehalose-6-phosphate phosphatase
 
* Synonym(s):
 
* Synonym(s):
  
Line 17: Line 17:
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ17025]]
+
* Gene: [[SJ08873]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ10128]]
+
* Gene: [[SJ07303]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ08873]]
+
* Gene: [[SJ18387]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
+
* Gene: [[SJ21183]]
−
* Gene: [[SJ21325]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ18485]]
+
* Gene: [[SJ21324]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ21325]]
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
* Gene: [[SJ21183]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ18387]]
+
* Gene: [[SJ18485]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ21324]]
+
* Gene: [[SJ13486]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ07303]]
+
* Gene: [[SJ17025]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ13486]]
+
* Gene: [[SJ10128]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
+
* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7900]], glycogen biosynthesis III (from α-maltose 1-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7900 PWY-7900]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
 
* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
+
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 87: Line 89:
 
** [http://www.uniprot.org/uniprot/O64897 O64897]
 
** [http://www.uniprot.org/uniprot/O64897 O64897]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trehalose-6-phosphate phosphatase}}
 
 
{{#set: ec number=EC-3.1.3.12}}
 
{{#set: ec number=EC-3.1.3.12}}
−
{{#set: gene associated=SJ17025|SJ10128|SJ08873|SJ21325|SJ18485|SJ21183|SJ18387|SJ21324|SJ07303|SJ13486}}
+
{{#set: common name=trehalose-6-phosphate phosphatase}}
−
{{#set: in pathway=TREHALOSESYN-PWY|TRESYN-PWY|PWY-881}}
+
{{#set: gene associated=SJ08873|SJ07303|SJ18387|SJ21183|SJ21324|SJ21325|SJ18485|SJ13486|SJ17025|SJ10128}}
 +
{{#set: in pathway=PWY-881|PWY-7900|TRESYN-PWY|TREHALOSESYN-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:16, 10 January 2019

Reaction TREHALOSEPHOSPHA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • trehalose-6-phosphate phosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α,α-trehalose 6-phosphate[c] + 1 H2O[c] => 1 α,α-trehalose[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-881, trehalose biosynthesis II: PWY-881
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7900, glycogen biosynthesis III (from α-maltose 1-phosphate): PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • TRESYN-PWY, trehalose biosynthesis I: TRESYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY, trehalose biosynthesis III: TREHALOSESYN-PWY
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=TREHALOSEPHOSPHA-RXN&oldid=20582"