Difference between revisions of "RXN-9533"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9533 RXN-9533] == * direction: ** LEFT-TO-RIGHT * common name: ** fatty acid synthase ** (3R)-3...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** fatty acid synthase
 
−
** (3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 +
* common name:
 +
** fatty acid synthase
 +
** (3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
Line 20: Line 20:
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ06944]]
+
* Gene: [[SJ15983]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11672]]
+
* Gene: [[SJ18059]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ17743]]
+
* Gene: [[SJ06617]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ13014]]
+
* Gene: [[SJ06616]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18059]]
+
* Gene: [[SJ04769]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 38: Line 38:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ17743]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19629]]
+
* Gene: [[SJ13014]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15983]]
+
* Gene: [[SJ11672]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ00613]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 53: Line 50:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03883]]
+
* Gene: [[SJ19629]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06617]]
+
* Gene: [[SJ00613]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06616]]
+
* Gene: [[SJ00320]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 65: Line 62:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ04769]]
+
* Gene: [[SJ03883]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ06944]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
** '''31''' reactions found over '''31''' reactions in the full pathway
 
** '''31''' reactions found over '''31''' reactions in the full pathway
 
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
 
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
Line 81: Line 81:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=fatty acid synthase}}
 
−
{{#set: common name=(3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase}}
 
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-4.2.1.59}}
 
{{#set: ec number=EC-4.2.1.59}}
−
{{#set: gene associated=SJ06944|SJ11672|SJ17743|SJ13014|SJ18059|SJ04443|SJ00320|SJ19629|SJ15983|SJ00613|SJ10624|SJ03883|SJ06617|SJ06616|SJ10275|SJ04769}}
+
{{#set: common name=fatty acid synthase}}
−
{{#set: in pathway=PWY-5994|PWY-5971|PWY-7664}}
+
{{#set: common name=(3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase}}
 +
{{#set: gene associated=SJ15983|SJ18059|SJ06617|SJ06616|SJ04769|SJ04443|SJ17743|SJ13014|SJ11672|SJ10624|SJ19629|SJ00613|SJ00320|SJ10275|SJ03883|SJ06944}}
 +
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7664}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 15:22, 10 January 2019

Reaction RXN-9533

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • fatty acid synthase
    • (3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 13 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

"(3R)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase" cannot be used as a page name in this wiki.



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