Difference between revisions of "3.1.26.3-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease III ** r...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.26.3 EC-3.1.26.3] | ||
* common name: | * common name: | ||
** ribonuclease III | ** ribonuclease III | ||
** ribonuclease | ** ribonuclease | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 RNase III mRNA processing substrate[c] '''+''' 2 H2O[c] '''=>''' 1 RNase III processing product mRNA[c] '''+''' 2 an mRNA fragment[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ17143]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: GO-TERM |
| − | + | ||
* Gene: [[SJ17141]] | * Gene: [[SJ17141]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | * Gene: [[ | + | * Gene: [[SJ01852]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ15619]] | * Gene: [[SJ15619]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 35: | Line 35: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | * Gene: [[ | + | * Gene: [[SJ08968]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| Line 59: | Line 59: | ||
** [http://www.uniprot.org/uniprot/O69469 O69469] | ** [http://www.uniprot.org/uniprot/O69469 O69469] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-3.1.26.3}} | ||
{{#set: common name=ribonuclease III}} | {{#set: common name=ribonuclease III}} | ||
{{#set: common name=ribonuclease}} | {{#set: common name=ribonuclease}} | ||
| − | + | {{#set: gene associated=SJ17143|SJ17141|SJ01852|SJ15619|SJ08973|SJ08968}} | |
| − | {{#set: gene associated= | + | |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:38, 10 January 2019
Contents
Reaction 3.1.26.3-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- ribonuclease III
- ribonuclease
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 RNASE-III-MRNA-PROCESSING-SUBSTRATE[c] + 2 WATER[c] => 1 RNASE-III-PROCESSING-PRODUCT-MRNA[c] + 2 mRNA-Fragments[c]
- With common name(s):
- 1 RNase III mRNA processing substrate[c] + 2 H2O[c] => 1 RNase III processing product mRNA[c] + 2 an mRNA fragment[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ17143
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ17141
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ01852
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ15619
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08973
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08968
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
