Difference between revisions of "GDP-MANNOSE-6-DEHYDROGENASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** GDP-mannose 6-dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
 
** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
 +
* common name:
 +
** GDP-mannose 6-dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 3 [[PROTON]][c] '''+''' 2 [[NADH]][c] '''+''' 1 [[CPD-1828]][c]
+
** 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 2 NAD+[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 3 H+[c] '''+''' 2 NADH[c] '''+''' 1 GDP-α-D-mannuronate[c]
+
** 2 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 3 H+[c] '''+''' 1 GDP-α-D-mannuronate[c] '''+''' 2 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ11033]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ03911]]
 
* Gene: [[SJ03911]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ11033]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ11024]]
 
* Gene: [[SJ11024]]
Line 25: Line 25:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
 
* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 44: Line 44:
 
** [http://www.uniprot.org/uniprot/P11759 P11759]
 
** [http://www.uniprot.org/uniprot/P11759 P11759]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GDP-mannose 6-dehydrogenase}}
 
 
{{#set: ec number=EC-1.1.1.132}}
 
{{#set: ec number=EC-1.1.1.132}}
−
{{#set: gene associated=SJ11033|SJ03911|SJ11024}}
+
{{#set: common name=GDP-mannose 6-dehydrogenase}}
−
{{#set: in pathway=PWY-6082|PWY-6073}}
+
{{#set: gene associated=SJ03911|SJ11033|SJ11024}}
 +
{{#set: in pathway=PWY-6073|PWY-6082}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:45, 10 January 2019

Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • GDP-mannose 6-dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 NAD+[c] + 1 H2O[c] + 1 GDP-α-D-mannose[c] => 3 H+[c] + 1 GDP-α-D-mannuronate[c] + 2 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6073, alginate biosynthesis I (algal): PWY-6073
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=GDP-MANNOSE-6-DEHYDROGENASE-RXN&oldid=21528"