Difference between revisions of "QUINOPRIBOTRANS-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotin...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** nicotinate-nucleotide diphosphorylase (carboxylating)
 
−
** quinolinate phosphoribosyltransferase (decarboxylating)
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
 
** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
 +
* common name:
 +
** quinolinate phosphoribosyltransferase (decarboxylating)
 +
** nicotinate-nucleotide diphosphorylase (carboxylating)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c]
+
** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''+''' 2 H+[c] '''=>''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 21: Line 21:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ11253]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ04451]]
 
* Gene: [[SJ04451]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ11253]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
 
* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 53: Line 53:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12735 12735]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
 
** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
Line 64: Line 64:
 
** [http://www.uniprot.org/uniprot/P77938 P77938]
 
** [http://www.uniprot.org/uniprot/P77938 P77938]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
 
−
{{#set: common name=quinolinate phosphoribosyltransferase (decarboxylating)}}
 
 
{{#set: ec number=EC-2.4.2.19}}
 
{{#set: ec number=EC-2.4.2.19}}
−
{{#set: gene associated=SJ19144|SJ11253|SJ04451}}
+
{{#set: common name=quinolinate phosphoribosyltransferase (decarboxylating)}}
−
{{#set: in pathway=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-7342}}
+
{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
 +
{{#set: gene associated=SJ19144|SJ04451|SJ11253}}
 +
{{#set: in pathway=PYRIDNUCSYN-PWY|PWY-5653|PWY-7342|PWY-5316}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:53, 10 January 2019

Reaction QUINOPRIBOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • quinolinate phosphoribosyltransferase (decarboxylating)
    • nicotinate-nucleotide diphosphorylase (carboxylating)
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis: PWY-7342
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5316, nicotine biosynthesis: PWY-5316
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=QUINOPRIBOTRANS-RXN&oldid=21780"