Difference between revisions of "RXN-17523"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** LEFT-TO-RIGHT * common name: ** heme oxygenase * ec number:...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** heme oxygenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.14.15.20 EC-1.14.15.20]
 
** [http://enzyme.expasy.org/EC/1.14.15.20 EC-1.14.15.20]
 +
* common name:
 +
** heme oxygenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[OXYGEN-MOLECULE]][c] '''+''' 8 [[PROTON]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CARBON-MONOXIDE]][c] '''+''' 3 [[WATER]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 1 [[BILIVERDINE]][c]
+
** 1 [[PROTOHEME]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''+''' 8 [[PROTON]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[FE+2]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 oxygen[c] '''+''' 8 H+[c] '''+''' 1 ferroheme b[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 carbon monoxide[c] '''+''' 3 H2O[c] '''+''' 1 Fe2+[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 biliverdin-IX-α[c]
+
** 1 ferroheme b[c] '''+''' 3 oxygen[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 8 H+[c] '''=>''' 1 biliverdin-IX-α[c] '''+''' 1 Fe2+[c] '''+''' 1 carbon monoxide[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 3 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
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*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
 
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
 
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
 
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=heme oxygenase}}
 
 
{{#set: ec number=EC-1.14.15.20}}
 
{{#set: ec number=EC-1.14.15.20}}
 +
{{#set: common name=heme oxygenase}}
 
{{#set: gene associated=SJ20370}}
 
{{#set: gene associated=SJ20370}}
−
{{#set: in pathway=PWY-7170|PWY-5915|PWY-5917|PWY-7580|PWY-7578|PWY-7579}}
+
{{#set: in pathway=PWY-7845|PWY-7579|PWY-7578|PWY-7170|PWY-5915|PWY-5917|PWY-7580}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 15:56, 10 January 2019

Reaction RXN-17523

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • heme oxygenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7845, heme degradation II: PWY-7845
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7579, phycourobilin biosynthesis: PWY-7579
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7578, phycoviolobilin biosynthesis: PWY-7578
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7170, phytochromobilin biosynthesis: PWY-7170
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5915, phycoerythrobilin biosynthesis I: PWY-5915
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5917, phycocyanobilin biosynthesis: PWY-5917
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7580, phycoerythrobilin biosynthesis II: PWY-7580
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-17523&oldid=21893"