Difference between revisions of "RXN-12583"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate:thiamin diphosphat...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 pyruvate[c] '''+''' 1 thiamine diphosphate[c] '''=>''' 1 2-(α-hydroxyethyl)thiamine diphosphate[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ00971]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ01042]] | * Gene: [[SJ01042]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 22: | Line 25: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* Gene: [[SJ19470]] | * Gene: [[SJ19470]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | * Gene: [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| + | * Gene: [[SJ09312]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| + | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 55: | Line 55: | ||
{{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}} | {{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}} | ||
{{#set: common name=pyruvate dehydrogenase (NAD+)}} | {{#set: common name=pyruvate dehydrogenase (NAD+)}} | ||
| − | {{#set: gene associated=SJ01042|SJ14925 | + | {{#set: gene associated=SJ00971|SJ01042|SJ14925|SJ19470|SJ09312}} |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana| | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:03, 10 January 2019
Contents
Reaction RXN-12583
- direction:
- LEFT-TO-RIGHT
- common name:
- pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
- pyruvate dehydrogenase (NAD+)
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 PYRUVATE[c] + 1 THIAMINE-PYROPHOSPHATE[c] => 1 2-ALPHA-HYDROXYETHYL-THPP[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 pyruvate[c] + 1 thiamine diphosphate[c] => 1 2-(α-hydroxyethyl)thiamine diphosphate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00971
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ01042
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14925
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19470
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09312
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
