Difference between revisions of "GMP-SYN-GLUT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xanthosine-5'...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2] | ** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2] | ||
| + | * common name: | ||
| + | ** xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming) | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GLT]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H2O[c] '''+''' 1 L-glutamine[c] '''+''' 1 XMP[c] '''+''' 1 ATP[c] '''=>''' 1 GMP[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 2 H+[c] '''+''' 1 L-glutamate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 23: | Line 23: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] | ||
| Line 39: | Line 39: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11681 11681] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231] | ** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231] | ||
| Line 59: | Line 59: | ||
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9] | ** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-6.3.5.2}} | {{#set: ec number=EC-6.3.5.2}} | ||
| + | {{#set: common name=xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)}} | ||
{{#set: gene associated=SJ08788|SJ22386}} | {{#set: gene associated=SJ08788|SJ22386}} | ||
{{#set: in pathway=PWY-7221}} | {{#set: in pathway=PWY-7221}} | ||
Latest revision as of 16:03, 10 January 2019
Contents
Reaction GMP-SYN-GLUT-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H2O[c] + 1 L-glutamine[c] + 1 XMP[c] + 1 ATP[c] => 1 GMP[c] + 1 diphosphate[c] + 1 AMP[c] + 2 H+[c] + 1 L-glutamate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ08788
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22386
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
