Difference between revisions of "RXNQT-4142"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] == * direction: ** LEFT-TO-RIGHT * common name: ** L-galactose-1-phosphate p...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.3.93 EC-3.1.3.93] | ** [http://enzyme.expasy.org/EC/3.1.3.93 EC-3.1.3.93] | ||
| + | * common name: | ||
| + | ** L-galactose-1-phosphate phosphatase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ20976]] | * Gene: [[SJ20976]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 26: | Line 22: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ18979]] | * Gene: [[SJ18979]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | * Gene: [[SJ04955]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 31: | Line 31: | ||
== Pathways == | == Pathways == | ||
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882] | * [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882] | ||
| − | ** ''' | + | ** '''6''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 43: | Line 43: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26350 26350] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674] | ** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.1.3.93}} | {{#set: ec number=EC-3.1.3.93}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=L-galactose-1-phosphate phosphatase}} |
| + | {{#set: gene associated=SJ20976|SJ18979|SJ04955}} | ||
{{#set: in pathway=PWY-882}} | {{#set: in pathway=PWY-882}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:08, 10 January 2019
Contents
Reaction RXNQT-4142
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- L-galactose-1-phosphate phosphatase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPDQT-4[c] + 1 WATER[c] => 1 L-Galactopyranose[c] + 1 Pi[c]
- With common name(s):
- 1 β-L-galactose 1-phosphate[c] + 1 H2O[c] => 1 L-galactopyranose[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ20976
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18979
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
- Gene: SJ04955
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
- 6 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
