Difference between revisions of "RXN-15130"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15130 RXN-15130] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathionine gamma-lyase *...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1] | ||
* common name: | * common name: | ||
** cystathionine gamma-lyase | ** cystathionine gamma-lyase | ||
** cystathionine γ-lyase | ** cystathionine γ-lyase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ | + | ** 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 L-cystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 | + | ** 1 L-cystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 L-cysteine[c] '''+''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ20026]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ05358]] | * Gene: [[SJ05358]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 24: | Line 28: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
| + | * [[PWY-801]], homocysteine and cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 46: | Line 48: | ||
** [http://www.uniprot.org/uniprot/Q47847 Q47847] | ** [http://www.uniprot.org/uniprot/Q47847 Q47847] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-4.4.1.1}} | ||
{{#set: common name=cystathionine gamma-lyase}} | {{#set: common name=cystathionine gamma-lyase}} | ||
{{#set: common name=cystathionine γ-lyase}} | {{#set: common name=cystathionine γ-lyase}} | ||
| − | + | {{#set: gene associated=SJ20026|SJ05358|SJ05357}} | |
| − | {{#set: gene associated=SJ05358|SJ05357 | + | {{#set: in pathway=PWY-801}} |
| − | {{#set: in pathway=}} | + | |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:09, 10 January 2019
Contents
Reaction RXN-15130
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- cystathionine gamma-lyase
- cystathionine γ-lyase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-CYSTATHIONINE[c] + 1 WATER[c] => 1 CYS[c] + 1 2-OXOBUTANOATE[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 L-cystathionine[c] + 1 H2O[c] => 1 L-cysteine[c] + 1 2-oxobutanoate[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ20026
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05358
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05357
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-801, homocysteine and cysteine interconversion: PWY-801
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
