Difference between revisions of "GLYCPDIESTER-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosph...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46] | ** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46] | ||
| + | * common name: | ||
| + | ** glycerophosphoryl diester phosphodiesterase, periplasmic | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[Glycerophosphodiesters]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Alcohols]][c] '''+''' 1 [[GLYCEROL-3P]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H2O[c] '''+''' 1 a glycerophosphodiester[c] '''=>''' 1 H+[c] '''+''' 1 an alcohol[c] '''+''' 1 sn-glycerol 3-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 35: | Line 35: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12970 12970] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857] | ** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857] | ||
| Line 45: | Line 47: | ||
** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5] | ** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.1.4.46}} | {{#set: ec number=EC-3.1.4.46}} | ||
| + | {{#set: common name=glycerophosphoryl diester phosphodiesterase, periplasmic}} | ||
{{#set: gene associated=SJ16458|SJ00999}} | {{#set: gene associated=SJ16458|SJ00999}} | ||
{{#set: in pathway=PWY-6952}} | {{#set: in pathway=PWY-6952}} | ||
Latest revision as of 15:12, 10 January 2019
Contents
Reaction GLYCPDIESTER-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- glycerophosphoryl diester phosphodiesterase, periplasmic
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 Glycerophosphodiesters[c] => 1 PROTON[c] + 1 Alcohols[c] + 1 GLYCEROL-3P[c]
- With common name(s):
- 1 H2O[c] + 1 a glycerophosphodiester[c] => 1 H+[c] + 1 an alcohol[c] + 1 sn-glycerol 3-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ16458
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00999
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6952, glycerophosphodiester degradation: PWY-6952
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
