Difference between revisions of "GLUCOKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase ** glucoki...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** hexokinase
 
−
** glucokinase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
 
** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
 
** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
 
** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
 +
* common name:
 +
** hexokinase
 +
** glucokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[Glucopyranose]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 D-glucopyranose[c] '''=>''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 D-glucopyranose[c] '''+''' 1 ATP[c] '''=>''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ19906]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
* Gene: [[SJ04919]]
 
* Gene: [[SJ04919]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 29: Line 26:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
* Gene: [[SJ19906]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
+
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
+
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
−
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
** '''12''' reactions found over '''15''' reactions in the full pathway
 
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
** '''10''' reactions found over '''10''' reactions in the full pathway
Line 54: Line 40:
 
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
Line 86: Line 86:
 
** [http://www.uniprot.org/uniprot/O31392 O31392]
 
** [http://www.uniprot.org/uniprot/O31392 O31392]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hexokinase}}
 
−
{{#set: common name=glucokinase}}
 
 
{{#set: ec number=EC-2.7.1.1}}
 
{{#set: ec number=EC-2.7.1.1}}
 
{{#set: ec number=EC-2.7.1.2}}
 
{{#set: ec number=EC-2.7.1.2}}
−
{{#set: gene associated=SJ19906|SJ04919|SJ12224}}
+
{{#set: common name=hexokinase}}
−
{{#set: in pathway=PWY0-1182|PWY-7238|GLYCOCAT-PWY|PWY-621|PWY-7385|GLUCOSE1PMETAB-PWY|P124-PWY|PWY-5514|TREDEGLOW-PWY|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-2722|PWY-5661}}
+
{{#set: common name=glucokinase}}
 +
{{#set: gene associated=SJ04919|SJ12224|SJ19906}}
 +
{{#set: in pathway=TREDEGLOW-PWY|P124-PWY|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-621|PWY-2722|PWY0-1182|GLYCOCAT-PWY|PWY-5514|PWY-7238|GLUCOSE1PMETAB-PWY|PWY-7385|PWY-5661}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:32, 10 January 2019

Reaction GLUCOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • hexokinase
    • glucokinase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TREDEGLOW-PWY, trehalose degradation I (low osmolarity): TREDEGLOW-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-2723, trehalose degradation V: PWY-2723
    • 2 reactions found over 3 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-2722, trehalose degradation IV: PWY-2722
    • 1 reactions found over 3 reactions in the full pathway
  • PWY0-1182, trehalose degradation II (trehalase): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • GLYCOCAT-PWY, glycogen degradation I: GLYCOCAT-PWY
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 5 reactions found over 8 reactions in the full pathway
  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation: GLUCOSE1PMETAB-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5661, GDP-glucose biosynthesis: PWY-5661
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=GLUCOKIN-RXN&oldid=23009"