Difference between revisions of "CDPDIGLYSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** CTP:phosphatida...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41] | ||
* common name: | * common name: | ||
** CTP:phosphatidate cytidyltransferase | ** CTP:phosphatidate cytidyltransferase | ||
** phosphatidate cytidylyltransferase | ** phosphatidate cytidylyltransferase | ||
− | |||
− | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[CTP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+ | + | ** 1 CTP[c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 a CDP-diacylglycerol[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ03624]] |
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[SJ07612]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | * Gene: [[ | + | * Gene: [[SJ18082]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ12798]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ21593]] | * Gene: [[SJ21593]] | ||
− | |||
− | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ12148]] | * Gene: [[SJ12148]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | * Gene: [[ | + | * Gene: [[SJ20423]] |
− | + | ||
− | + | ||
− | + | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667] | * [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817] | ||
+ | ** '''6''' reactions found over '''16''' reactions in the full pathway | ||
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319] | * [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
Line 55: | Line 55: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16230 16230] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799] | ** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799] | ||
Line 67: | Line 67: | ||
** [http://www.uniprot.org/uniprot/Q49433 Q49433] | ** [http://www.uniprot.org/uniprot/Q49433 Q49433] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: ec number=EC-2.7.7.41}} | ||
{{#set: common name=CTP:phosphatidate cytidyltransferase}} | {{#set: common name=CTP:phosphatidate cytidyltransferase}} | ||
{{#set: common name=phosphatidate cytidylyltransferase}} | {{#set: common name=phosphatidate cytidylyltransferase}} | ||
− | + | {{#set: gene associated=SJ03624|SJ07612|SJ18082|SJ12798|SJ21593|SJ12148|SJ20423}} | |
− | {{#set: gene associated= | + | {{#set: in pathway=PWY-5667|PWY-7817|PWY0-1319|PWY-5981}} |
− | {{#set: in pathway=PWY- | + | |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 16:32, 10 January 2019
Contents
Reaction CDPDIGLYSYN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- CTP:phosphatidate cytidyltransferase
- phosphatidate cytidylyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CTP[c] + 1 L-PHOSPHATIDATE[c] + 1 PROTON[c] => 1 CDPDIACYLGLYCEROL[c] + 1 PPI[c]
- With common name(s):
- 1 CTP[c] + 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] + 1 H+[c] => 1 a CDP-diacylglycerol[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03624
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07612
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18082
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12798
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ21593
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ12148
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ20423
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
- 4 reactions found over 4 reactions in the full pathway
- PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
- 4 reactions found over 4 reactions in the full pathway
- PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links