Difference between revisions of "HEMN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMN-RXN HEMN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
 
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[CARBON-DIOXIDE]][c]
+
** 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c] '''=>''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[CH33ADO]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coproporphyrinogen III[c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 1 protoporphyrinogen IX[c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 2 L-methionine[c] '''+''' 2 CO2[c]
+
** 2 S-adenosyl-L-methionine[c] '''+''' 1 coproporphyrinogen III[c] '''=>''' 1 protoporphyrinogen IX[c] '''+''' 2 CO2[c] '''+''' 2 L-methionine[c] '''+''' 2 5'-deoxyadenosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ06609]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ05457]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ16512]]
 
* Gene: [[SJ16512]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ06609]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ03663]]
 
* Gene: [[SJ03663]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ20556]]
 
* Gene: [[SJ20556]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ05457]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[HEMESYN2-PWY]], heme b biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15425 15425]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15426 15426]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06895 R06895]
 
** [http://www.genome.jp/dbget-bin/www_bget?R06895 R06895]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: ec number=EC-1.3.98.3}}
 
{{#set: ec number=EC-1.3.98.3}}
−
{{#set: gene associated=SJ06609|SJ05457|SJ16512|SJ03663|SJ20556}}
+
{{#set: gene associated=SJ16512|SJ06609|SJ03663|SJ20556|SJ05457}}
−
{{#set: in pathway=PWY-5531|HEMESYN2-PWY}}
+
{{#set: in pathway=HEMESYN2-PWY|PWY-5531}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:35, 10 January 2019

Reaction HEMN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HEMESYN2-PWY, heme b biosynthesis II (anaerobic): HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=HEMN-RXN&oldid=23121"