Difference between revisions of "6PGLUCONDEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosp...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
 
* common name:
 
* common name:
 
** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
 
** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
 
** phosphogluconate dehydrogenase (decarboxylating)
 
** phosphogluconate dehydrogenase (decarboxylating)
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
 
 
* Synonym(s):
 
* Synonym(s):
 
** 6PGD
 
** 6PGD
Line 16: Line 16:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[RIBULOSE-5P]][c]
+
** 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 NAD(P)H[c] '''+''' 1 CO2[c] '''+''' 1 D-ribulose 5-phosphate[c]
+
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 CO2[c] '''+''' 1 NAD(P)H[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ12699]]
+
* Gene: [[SJ06127]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11815]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ11912]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ12698]]
 
* Gene: [[SJ12698]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07211]]
+
* Gene: [[SJ22264]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11912]]
+
* Gene: [[SJ16180]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ15062]]
−
** Source: [[orthology-nannochloropsis_salina]]
+
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
* Gene: [[SJ00878]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16180]]
+
* Gene: [[SJ11815]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06127]]
+
* Gene: [[SJ14331]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ07211]]
−
* Gene: [[SJ15062]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ14331]]
+
* Gene: [[SJ12699]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ22264]]
+
* Gene: [[SJ00878]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 66: Line 66:
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 76: Line 76:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10117 10117]
 
* UNIPROT:
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P14332 P14332]
 
** [http://www.uniprot.org/uniprot/P14332 P14332]
Line 112: Line 112:
 
** [http://www.uniprot.org/uniprot/O32911 O32911]
 
** [http://www.uniprot.org/uniprot/O32911 O32911]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.1.1.351}}
 
{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
 
{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
 
{{#set: common name=phosphogluconate dehydrogenase (decarboxylating)}}
 
{{#set: common name=phosphogluconate dehydrogenase (decarboxylating)}}
−
{{#set: ec number=EC-1.1.1.351}}
 
 
{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
 
{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
−
{{#set: gene associated=SJ12699|SJ11815|SJ12698|SJ07211|SJ11912|SJ00878|SJ16180|SJ06127|SJ15062|SJ14331|SJ22264}}
+
{{#set: gene associated=SJ06127|SJ11912|SJ12698|SJ22264|SJ16180|SJ15062|SJ11815|SJ14331|SJ07211|SJ12699|SJ00878}}
 
{{#set: in pathway=P122-PWY}}
 
{{#set: in pathway=P122-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:39, 10 January 2019

Reaction 6PGLUCONDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
    • phosphogluconate dehydrogenase (decarboxylating)
  • Synonym(s):
    • 6PGD
    • 6-phosphogluconic carboxylase
    • 6-phosphogluconic dehydrogenase
    • Phosphogluconic acid dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 16 reactions found over 18 reactions in the full pathway

Reconstruction information

External links


"phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating" cannot be used as a page name in this wiki.




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