Difference between revisions of "3-OXOACYL-ACP-SYNTH-BASE-RXN"

Revision as of 09:37, 18 May 2018

Reaction 3-OXOACYL-ACP-SYNTH-BASE-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • fatty acid synthase
• ec number:
  • EC-2.3.1.86
  • EC-2.3.1.85
  • EC-2.3.1.41
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PROTON[c] + 1 ACETYL-ACP[c] + 1 MALONYL-ACP[c] => 1 Acetoacetyl-ACPs[c] + 1 CARBON-DIOXIDE[c] + 1 ACP[c]
• With common name(s):
  • 1 H+[c] + 1 an acetyl-[acp][c] + 1 a malonyl-[acp][c] => 1 an acetoacetyl-[acp][c] + 1 CO2[c] + 1 a holo-[acyl-carrier protein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ06616
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00613
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06617
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06944
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ15983
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ11672
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ18059
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ15984
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
• Gene: SJ04769
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ13014
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ19629
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ04443
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ10624
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00320
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00005
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ03883
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ17743
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM

Pathways

• PWY-5965, fatty acid biosynthesis initiation III: PWY-5965
  • 1 reactions found over 2 reactions in the full pathway
• PWY-5966, fatty acid biosynthesis initiation II: PWY-5966
  • 2 reactions found over 2 reactions in the full pathway
• FASYN-INITIAL-PWY, superpathway of fatty acid biosynthesis initiation (E. coli): FASYN-INITIAL-PWY
  • 5 reactions found over 8 reactions in the full pathway
• PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
  • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• UNIPROT:
  • P23902
  • P0A6R0
  • P49327
  • P43710
  • Q9HYR2
  • O67612
  • P20582
  • Q9JT63
  • Q9JW56
  • Q9PMZ6
  • P43711
  • O25284
  • Q9JX65
  • O34340
  • Q9PI63
  • P0AAI5
  • Q07510
  • Q06097
  • P41175
  • P31176
  • Q40027
  • Q40028
  • P73283
  • P0A953
  • O64485
  • O65677
  • Q39310
  • O23738
  • Q41134
  • Q41135
  • Q54208
  • O54440
  • P55338
  • Q9RA31
  • P12276
  • P12785