Difference between revisions of "CYSTEINE--TRNA-LIGASE-RXN"

Revision as of 09:54, 18 May 2018

Reaction CYSTEINE--TRNA-LIGASE-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • cysteine-tRNA ligase
• ec number:
  • EC-6.1.1.16
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CYS[c] + 1 ATP[c] + 1 CYS-tRNAs[c] => 1 Charged-CYS-tRNAs[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 L-cysteine[c] + 1 ATP[c] + 1 a tRNAcys[c] => 1 an L-cysteinyl-[tRNAcys][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ09098
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ12227
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ19796
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ21439
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus

Pathways

• TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
  • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R03650
• UNIPROT:
  • Q9PPB8
  • Q06752
  • P43816
  • O29836
  • Q9CEJ0
  • O58370
  • O83129
  • Q9ZE62
  • Q9ZKW6
  • Q9WZH8
  • P41259
  • O51545
  • Q9Z6X4
  • O67163
  • Q9JWJ3
  • P47495
  • P75423
  • P74330
  • Q9UWP2
  • P21888