Difference between revisions of "RXN0-2023"

Revision as of 10:05, 18 May 2018

Reaction RXN0-2023

• direction:
  • LEFT-TO-RIGHT
• common name:
  • tRNA-specific 2-thiouridylase
• ec number:
  • EC-2.8.1.13
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 TusE-S-sulfanylcysteine[c] + 1 Donor-H2[c] + 1 tRNA-uridine34[c] + 1 ATP[c] => 1 PROTON[c] + 1 TusE-L-cysteine[c] + 1 tRNA-2-thiouridine34[c] + 1 AMP[c] + 1 Acceptor[c] + 1 PPI[c]
• With common name(s):
  • 1 a [TusE sulfur carrier protein]-S-sulfanylcysteine[c] + 1 a reduced electron acceptor[c] + 1 a uridine34 in tRNA[c] + 1 ATP[c] => 1 H+[c] + 1 a [TusE sulfur carrier protein]-L-cysteine[c] + 1 a 2-thiouridine34 in tRNA[c] + 1 AMP[c] + 1 an oxidized electron acceptor[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ13939
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ00619
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus

Pathways

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links