Difference between revisions of "GPH-RXN"

Revision as of 10:27, 18 May 2018

Reaction GPH-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • phosphoglycolate phosphatase
• ec number:
  • EC-3.1.3.18
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 WATER[c] + 1 CPD-67[c] => 1 Pi[c] + 1 GLYCOLLATE[c]
• With common name(s):
  • 1 H2O[c] + 1 2-phosphoglycolate[c] => 1 phosphate[c] + 1 glycolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ10617
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
• Gene: SJ04928
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Pathways

• PWY-181, photorespiration: PWY-181
  • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 14369
• LIGAND-RXN:
  • R01334
• UNIPROT:
  • P40852
  • P40853
  • P32662
  • P73525
  • O33512
  • Q9S586