Difference between revisions of "PHOSGLYPHOS-RXN"

Revision as of 10:38, 18 May 2018

Reaction PHOSGLYPHOS-RXN

• direction:
  • REVERSIBLE
• common name:
  • phosphoglycerate kinase
• ec number:
  • EC-2.7.2.3
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 G3P[c] <=> 1 DPG[c] + 1 ADP[c]
• With common name(s):
  • 1 ATP[c] + 1 3-phospho-D-glycerate[c] <=> 1 1,3-bisphospho-D-glycerate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ10780
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ18020
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ05024
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ15992
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ15971
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ15991
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Pathways

• PWY-1042, glycolysis IV (plant cytosol): PWY-1042
  • 9 reactions found over 10 reactions in the full pathway
• P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
  • 11 reactions found over 12 reactions in the full pathway
• GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
  • 13 reactions found over 13 reactions in the full pathway
• GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
  • 12 reactions found over 12 reactions in the full pathway
• PWY-6901, superpathway of glucose and xylose degradation: PWY-6901
  • 10 reactions found over 12 reactions in the full pathway
• SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
  • 6 reactions found over 9 reactions in the full pathway
• P124-PWY, Bifidobacterium shunt: P124-PWY
  • 12 reactions found over 15 reactions in the full pathway
• PWY-6886, 1-butanol autotrophic biosynthesis (engineered): PWY-6886
  • 8 reactions found over 11 reactions in the full pathway
• CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
  • 13 reactions found over 13 reactions in the full pathway
• ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
  • 10 reactions found over 10 reactions in the full pathway
• P122-PWY, heterolactic fermentation: P122-PWY
  • 16 reactions found over 18 reactions in the full pathway
• PWY66-399, gluconeogenesis III: PWY66-399
  • 11 reactions found over 12 reactions in the full pathway
• PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
  • 11 reactions found over 11 reactions in the full pathway
• PWY-7003, glycerol degradation to butanol: PWY-7003
  • 8 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 14801
• LIGAND-RXN:
  • R01512
• UNIPROT:
  • P11977
  • P09411
  • P09041
  • P07205
  • P16617
  • Q37743
  • Q58058
  • P56154
  • O29119
  • Q01655
  • Q9URB3
  • P47542
  • O27121
  • Q9PMQ5
  • P40924
  • P43726
  • O66519
  • Q9JWS8
  • Q9CIW1
  • P36204
  • Q59181
  • P50319
  • P50310
  • P51903
  • P18912
  • P41757
  • P27362
  • P24269
  • P00560
  • P25055
  • Q01604
  • P00558
  • P07377
  • P07378
  • P14828
  • P09404
  • P29408
  • P20972
  • P20971
  • P24590
  • P29409
  • P33161
  • P29405
  • P50317
  • P50315
  • P29407
  • P61884
  • Q42542
  • P50318
  • P46712
  • P78018
  • Q49073
  • Q42961
  • Q42962
  • O81394
  • P41758
  • O32756
  • P38667
  • P08966
  • P08967
  • P0A799
  • P09188
  • P14228
  • P08891
  • P08892
  • P08893
  • P12782
  • P12783