Difference between revisions of "RXN-16418"

Revision as of 11:13, 18 May 2018

Reaction RXN-16418

• direction:
  • LEFT-TO-RIGHT
• common name:
  • long-chain fatty acid-CoA ligase
• ec number:
  • EC-6.2.1.3
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 OCTADEC-9-ENE-118-DIOIC-ACID[c] + 1 CO-A[c] => 1 AMP[c] + 1 PPI[c] + 1 CPD-17624[c]
• With common name(s):
  • 1 ATP[c] + 1 α,ω-9Z-octadecenedioate[c] + 1 coenzyme A[c] => 1 AMP[c] + 1 diphosphate[c] + 1 ω-carboxy-(9Z)-octadec-9-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ13972
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ03650
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ08692
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08691
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05591
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ08690
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Pathways

• PWY-1121, suberin monomers biosynthesis: PWY-1121
  • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links