Difference between revisions of "RXN-9516"

Revision as of 11:23, 18 May 2018

Reaction RXN-9516

• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-oxo-hexanoyl-[acyl-carrier protein] synthase
  • 3-oxoacyl-[acyl-carrier-protein] synthase
• ec number:
  • EC-2.3.1.41
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PROTON[c] + 1 Butanoyl-ACPs[c] + 1 MALONYL-ACP[c] => 1 3-oxo-hexanoyl-ACPs[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 H+[c] + 1 a butyryl-[acp][c] + 1 a malonyl-[acp][c] => 1 a 3-oxo-hexanoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ00005
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ10624
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06617
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ15984
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ04443
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ15983
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
• Gene: SJ18059
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway
• PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
  • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links