DGDPKIN-RXN

Reaction DGDPKIN-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-2.7.4.6
• common name:
  • dGDP kinase
  • nucleoside diphosphate kinase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 DGDP[c] => 1 DGTP[c] + 1 ADP[c]
• With common name(s):
  • 1 ATP[c] + 1 dGDP[c] => 1 dGTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ20076
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21705
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ07124
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ20794
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ10125
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ21967
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21816
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ08159
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ16893
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
  • 2 reactions found over 2 reactions in the full pathway
• PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
  • 3 reactions found over 6 reactions in the full pathway
• PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 27691
• LIGAND-RXN:
  • R01857