R223-RXN

Reaction R223-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-6.2.1.3
• common name:
  • octanoyl-CoA ligase
  • acyl-CoA synthetase
  • long-chain fatty acid-CoA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-195[c] + 1 ATP[c] + 1 CO-A[c] => 1 PPI[c] + 1 CPD-196[c] + 1 AMP[c]
• With common name(s):
  • 1 octanoate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 diphosphate[c] + 1 octanoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ08690
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08692
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ03650
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ13972
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ08691
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05591
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM

Pathways

• PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
  • 5 reactions found over 6 reactions in the full pathway
• P221-PWY, octane oxidation: P221-PWY
  • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools