RNA-LIGASE-ATP-RXN

Reaction RNA-LIGASE-ATP-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-6.5.1.3
• common name:
  • RNA ligase (ATP)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 3Prime-OH-Terminated-RNAs[c] + 1 5-Phospho-RNA[c] + 1 ATP[c] => 1 RNA-Holder[c] + 1 AMP[c] + 1 PPI[c]
• With common name(s):
  • 1 an [RNA]-3'-hydroxyl[c] + 1 a 5'-phospho-ribonucleoside-[RNA][c] + 1 ATP[c] => 1 a ribonucleic acid[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ03634
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ14703
  • Source: orthology-ectocarpus_siliculosus

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R07640
• UNIPROT:
  • P00971