ACONITATEDEHYDR-RXN

Reaction ACONITATEDEHYDR-RXN

• direction:
  • REVERSIBLE
• common name:
  • citrate hydro-lyase (cis-aconitate-forming)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CIT[c] <=> 1 CIS-ACONITATE[c] + 1 WATER[c]
• With common name(s):
  • 1 citrate[c] <=> 1 cis-aconitate[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ22396
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ18471
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
  • 10 reactions found over 11 reactions in the full pathway
• GLYOXYLATE-BYPASS, glyoxylate cycle: GLYOXYLATE-BYPASS
  • 6 reactions found over 6 reactions in the full pathway
• PWY66-398, TCA cycle III (animals): PWY66-398
  • 10 reactions found over 11 reactions in the full pathway
• REDCITCYC, TCA cycle VIII (helicobacter): REDCITCYC
  • 5 reactions found over 9 reactions in the full pathway
• PWY-5392, reductive TCA cycle II: PWY-5392
  • 6 reactions found over 12 reactions in the full pathway
• P23-PWY, reductive TCA cycle I: P23-PWY
  • 10 reactions found over 12 reactions in the full pathway
• PWY-7124, ethylene biosynthesis V (engineered): PWY-7124
  • 8 reactions found over 10 reactions in the full pathway
• P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
  • 10 reactions found over 11 reactions in the full pathway
• PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
  • 10 reactions found over 12 reactions in the full pathway
• FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
  • 11 reactions found over 16 reactions in the full pathway
• PWY-6728, methylaspartate cycle: PWY-6728
  • 11 reactions found over 18 reactions in the full pathway
• PWY-6549, L-glutamine biosynthesis III: PWY-6549
  • 8 reactions found over 9 reactions in the full pathway
• PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
  • 7 reactions found over 9 reactions in the full pathway
• PWY-5690, TCA cycle II (plants and fungi): PWY-5690
  • 8 reactions found over 9 reactions in the full pathway
• PWY-5750, itaconate biosynthesis: PWY-5750
  • 3 reactions found over 4 reactions in the full pathway
• TCA, TCA cycle I (prokaryotic): TCA
  • 9 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 10228
• PIR:
  • A35544
  • A44153
  • A44154
  • A47184
  • A81801
  • B48642
  • C64362
  • C64617
  • C81356
  • F64734
  • F70873
  • G64875
  • G69599
  • G86708
  • H81775
  • S17526
  • S18720
  • S26403
  • S49849
  • S50387
  • S57528
  • S57805
  • S76777
  • T04693
  • T04820
  • T07611
  • T10101
  • T52543
• LIGAND-RXN:
  • R01325
• UNIPROT:
  • P16276
  • Q01059
  • Q9TSA1
  • Q9JTI5
  • P37032
  • P81291
  • Q9PP88
  • P36683
  • O53166
  • P25516
  • P09339
  • Q9CHQ5
  • Q9JT05
  • Q99798
  • P28271
  • P21399
  • Q42669
  • P19414
  • P20004
  • P49609
  • P74582
  • Q42560
  • Q9SZ36
  • O04916