DGDPKIN-RXN

From metabolic_network

Revision as of 12:08, 18 May 2018 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")

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Contents

1 Reaction DGDPKIN-RXN
2 Reaction Formula
3 Genes associated with this reaction
4 Pathways
5 Reconstruction information
6 External links

Reaction DGDPKIN-RXN

direction:
- LEFT-TO-RIGHT
common name:
- nucleoside diphosphate kinase
- dGDP kinase
ec number:
- EC-2.7.4.6
Synonym(s):

Reaction Formula

With identifiers:
- 1 ATP[c] + 1 DGDP[c] => 1 DGTP[c] + 1 ADP[c]
With common name(s):
- 1 ATP[c] + 1 dGDP[c] => 1 dGTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Gene: SJ21705
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
Gene: SJ08159
- Source: orthology-ectocarpus_siliculosus
Gene: SJ10125
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
Gene: SJ21816
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Gene: SJ16893
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Gene: SJ21967
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ20076
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ20794
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ07124
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana

Pathways

PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
- 4 reactions found over 4 reactions in the full pathway
PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
- 3 reactions found over 6 reactions in the full pathway
PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
- 2 reactions found over 2 reactions in the full pathway

Reconstruction information

Category: orthology
- Source: orthology-arabidopsis_thaliana
  - Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
  - Tool: pantograph
- Source: orthology-nannochloropsis_salina
  - Tool: pantograph
Category: annotation
- Source: annotation-saccharina_japonica_genome
  - Tool: pathwaytools

External links

RHEA:
- 27690
LIGAND-RXN:
- R01857

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=DGDPKIN-RXN&oldid=10655"

Reaction