3.1.13.4-RXN

Reaction 3.1.13.4-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • poly(A)-specific ribonuclease
• ec number:
  • EC-3.1.13.4
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 mRNAs-With-PolyA-Tails[c] + n WATER[c] => 1 mRNAs[c] + n AMP[c]
• With common name(s):
  • 1 a mRNA with poly(A) tail[c] + n H2O[c] => 1 an mRNA[c] + n AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ10711
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ12089
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18467
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ06404
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ17483
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ02384
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ03509
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05576
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ20721
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ10605
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ13458
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ16005
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08676
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Reconstruction information

• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• UNIPROT:
  • P32521
  • Q09798