3.5.1.88-RXN

Reaction 3.5.1.88-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-3.5.1.88
• common name:
  • peptide deformylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 FORMYL-L-METHIONYL-PEPTIDE[c] + 1 WATER[c] => 1 METHIONYL-PEPTIDE[c] + 1 FORMATE[c]
• With common name(s):
  • 1 a [protein] N-terminal-formyl-L-methionine[c] + 1 H2O[c] => 1 an N-terminal L-methionyl-[protein][c] + 1 formate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ06192
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 24421
• LIGAND-RXN:
  • R05635