RXN-5341

From metabolic_network

Revision as of 09:23, 18 May 2018 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5341 RXN-5341] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-glucosidase ** linamaras...")

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Contents

1 Reaction RXN-5341
2 Reaction Formula
3 Genes associated with this reaction
4 Pathways
5 Reconstruction information
6 External links

Reaction RXN-5341

direction:
- LEFT-TO-RIGHT
common name:
- beta-glucosidase
- linamarase (β-glucosidase)
ec number:
- EC-3.2.1.21
Synonym(s):

Reaction Formula

With identifiers:
- 1 LINAMARIN[c] + 1 WATER[c] => 1 Glucopyranose[c] + 1 2-HYDROXY-2-METHYLPROPANENITRILE[c]
With common name(s):
- 1 linamarin[c] + 1 H2O[c] => 1 D-glucopyranose[c] + 1 2-hydroxy-2-methylpropanenitrile[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Gene: SJ18318
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ04559
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
Gene: SJ05741
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ14973
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ05532
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ17199
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
Gene: SJ19930
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
Gene: SJ05782
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ14193
- Source: orthology-ectocarpus_siliculosus
Gene: SJ05257
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ05533
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ05740
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ00855
- Source: orthology-ectocarpus_siliculosus
Gene: SJ04558
- Source: annotation-saccharina_japonica_genome
  - Assignment: EC-NUMBER
Gene: SJ18897
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ16402
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM
Gene: SJ11958
- Source: annotation-saccharina_japonica_genome
  - Assignment: GO-TERM

Pathways

PWY-3121, linamarin degradation: PWY-3121
- 1 reactions found over 2 reactions in the full pathway
PWY-7091, linustatin bioactivation: PWY-7091
- 2 reactions found over 4 reactions in the full pathway

Reconstruction information

Category: orthology
- Source: orthology-ectocarpus_siliculosus
  - Tool: pantograph
Category: annotation
- Source: annotation-saccharina_japonica_genome
  - Tool: pathwaytools

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-5341&oldid=1924"

Reaction