3.4.19.12-RXN

Reaction 3.4.19.12-RXN

• direction:
  • LEFT-TO-RIGHT
• ec number:
  • EC-3.4.19.12
• common name:
  • deubiquitinase
  • thiol-dependent ubiquitinyl hydrolase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 WATER[c] + 1 PROTEIN-N-UBIQUITYL-LYSINE[c] => 1 Protein-L-lysine[c] + 1 Ubiquitin-C-Terminal-Glycine[c]
• With common name(s):
  • 1 H2O[c] + 1 a [protein]-N6-monoubiquitinyl-L-lysine[c] => 1 a [protein]-L-lysine[c] + 1 a [ubiquitin] C-terminal glycine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ20060
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ04492
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ09340
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21191
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ04883
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ01558
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ08877
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ20677
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ17737
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ00668
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06769
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ18580
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ13311
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ11947
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00763
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ14922
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ06125
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ06250
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ07195
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08878
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ18012
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ16268
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ17527
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ09684
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ16215
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06434
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08037
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ13152
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ03546
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ19097
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ07093
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ12744
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06165
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ10986
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18904
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ14936
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ13516
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ12489
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ02832
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ20903
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ08721
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ14921
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ13878
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ03978
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ19935
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ06081
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ19615
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18427
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ02538
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ04713
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ20359
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05236
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ02391
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ12830
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18229
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ16902
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ21243
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ04607
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ11948
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ14679
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ10746
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ07092
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ08983
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ09819
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ16762
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ05049
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ20555
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ00812
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ07630
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ18765
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ18482
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ14935
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ20573
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21849
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ16431
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ03827
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R02418