RXNN-404

Reaction RXNN-404

• direction:
  • LEFT-TO-RIGHT
• common name:
  • amidase
• ec number:
  • EC-3.5.1.4
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 WATER[c] + 1 CPD-237[c] => 1 INDOLE_ACETATE_AUXIN[c] + 1 AMMONIUM[c]
• With common name(s):
  • 1 H2O[c] + 1 indole-3-acetamide[c] => 1 indole-3-acetate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ11012
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ22527
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ16279
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ01848
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-581, indole-3-acetate biosynthesis II: PWY-581
  • 5 reactions found over 13 reactions in the full pathway
• PWY-5025, indole-3-acetate biosynthesis IV (bacteria): PWY-5025
  • 1 reactions found over 2 reactions in the full pathway
• PWY-3161, indole-3-acetate biosynthesis III (bacteria): PWY-3161
  • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 34371
• LIGAND-RXN:
  • R03096