MALATE-DEH-RXN
From metabolic_network
Revision as of 11:37, 18 May 2018 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEH-RXN MALATE-DEH-RXN] == * direction: ** REVERSIBLE * common name: ** malate dehydrogenase...")
Contents
Reaction MALATE-DEH-RXN
- direction:
- REVERSIBLE
- common name:
- malate dehydrogenase
- ec number:
- Synonym(s):
- malate dehydrogenation
Reaction Formula
- With identifiers:
- 1 MAL[c] + 1 NAD[c] <=> 1 PROTON[c] + 1 NADH[c] + 1 OXALACETIC_ACID[c]
- With common name(s):
- 1 (S)-malate[c] + 1 NAD+[c] <=> 1 H+[c] + 1 NADH[c] + 1 oxaloacetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ15523
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05075
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-nannochloropsis_salina
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
- Gene: SJ15746
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
Pathways
- FERMENTATION-PWY, mixed acid fermentation: FERMENTATION-PWY
- 11 reactions found over 16 reactions in the full pathway
- PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
- 10 reactions found over 11 reactions in the full pathway
- PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
- 6 reactions found over 8 reactions in the full pathway
- MALATE-ASPARTATE-SHUTTLE-PWY, L-aspartate degradation II: MALATE-ASPARTATE-SHUTTLE-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-1622, formaldehyde assimilation I (serine pathway): PWY-1622
- 7 reactions found over 13 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 13 reactions found over 13 reactions in the full pathway
- P42-PWY, incomplete reductive TCA cycle: P42-PWY
- 5 reactions found over 7 reactions in the full pathway
- PWY-7383, anaerobic energy metabolism (invertebrates, cytosol): PWY-7383
- 5 reactions found over 7 reactions in the full pathway
- PWY-5392, reductive TCA cycle II: PWY-5392
- 6 reactions found over 12 reactions in the full pathway
- P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
- 10 reactions found over 11 reactions in the full pathway
- P23-PWY, reductive TCA cycle I: P23-PWY
- 10 reactions found over 12 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 8 reactions found over 9 reactions in the full pathway
- GLYOXYLATE-BYPASS, glyoxylate cycle: GLYOXYLATE-BYPASS
- 6 reactions found over 6 reactions in the full pathway
- PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
- 10 reactions found over 12 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 11 reactions found over 18 reactions in the full pathway
- PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
- 9 reactions found over 9 reactions in the full pathway
- P108-PWY, pyruvate fermentation to propanoate I: P108-PWY
- 2 reactions found over 7 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- PWY66-398, TCA cycle III (animals): PWY66-398
- 10 reactions found over 11 reactions in the full pathway
- TCA, TCA cycle I (prokaryotic): TCA
- 9 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- PIR:
- A32472
- A49496
- A60689
- C64110
- D81399
- DEBYMC
- DEBYMM
- DEBYMP
- DEEBM
- DEECM
- DEMSMC
- DEMSMM
- DEPGMM
- DEPUGW
- DEPUMW
- DERTMM
- DETWMA
- F85551
- G01650
- H64477
- I40383
- PA0040
- PA0079
- PN0162
- S03352
- S03958
- S04956
- S04957
- S04958
- S04959
- S04960
- S04961
- S07574
- S08981
- S44167
- S52039
- S57958
- S61213
- S75735
- T03272
- T06325
- T06326
- T06327
- T06328
- T06386
- T08015
- T08077
- T08177
- T09228
- T09263
- T09286
- T09291
- T09294
- T12433
- T18570
- T45206
- T45208
- T49932
- T51311
- T51862
- LIGAND-RXN:
- UNIPROT:
- Q07841
- P33163
- P44427
- Q9PHY2
- P22133
- P17505
- P32419
- P25077
- P14152
- Q8R1P0
- P19446
- P17783
- P04636
- P58408
- Q58820
- P49814
- Q93ZA7
- Q7M4Y9
- Q7M4Z0
- P10887
- P11386
- P19983
- P19981
- P19979
- P19977
- P19982
- P19978
- P19980
- P16142
- P46487
- P46488
- Q43744
- Q59202
- Q55383
- Q42972
- O81278
- O81279
- O65363
- O65364
- O81609
- Q43743
- Q42686
- P93106
- Q04820
- O48903
- O48904
- O48905
- O48906
- O24047
- Q9XTB4
- P50917
- Q49981
- Q9ZP05
- Q9ZP06
- Q9SN86