Semantic search

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
ACP-S-ACETYLTRANSFER-RXN	EC-2.3.1.86 EC-2.3.1.85 EC-2.3.1.38	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis	Tiso gene 13394 Tiso gene 15991 Tiso gene 10876 Tiso gene 136 Tiso gene 500 Tiso gene 135	PWY-5966 FASYN-INITIAL-PWY
ADCLY-RXN	EC-4.1.3.38	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 614 Tiso gene 17748	PWY-6543
ADENOSYLHOMOCYSTEINASE-RXN	EC-3.3.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14191	METHIONINE-DEG1-PWY PWY-5041
ADENYL-KIN-RXN	EC-2.7.4.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 694 Tiso gene 5837 Tiso gene 12257 Tiso gene 4816 Tiso gene 5839 Tiso gene 19036 Tiso gene 12256 Tiso gene 8576 Tiso gene 5387 Tiso gene 5081 Tiso gene 1453 Tiso gene 14116 Tiso gene 13477 Tiso gene 5388 Tiso gene 805 Tiso gene 3353 Tiso gene 19734	PWY-7219
ADENYLYLSULFKIN-RXN	EC-2.7.1.25	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-synechocystis	Tiso gene 17878 Tiso gene 9490 Tiso gene 17879 Tiso gene 16197 Tiso gene 1110	PWY-5340
ADPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 10617 Tiso gene 9916 Tiso gene 10138 Tiso gene 9915	PWY-7220 PWY-7227
AIRCARBOXY-RXN	EC-4.1.1.21	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 16011	PWY-6124
ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN	EC-2.6.1.44	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-athaliana Orthology-esiliculosus	Tiso gene 11231 Tiso gene 6134 Tiso gene 5726	GLYSYN-ALA-PWY
ALANINE-AMINOTRANSFERASE-RXN	EC-2.6.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 5959 Tiso gene 10957	ALANINE-DEG3-PWY PWY-7383 PWY-7117 ALACAT2-PWY PWY-7115 ALANINE-SYN2-PWY
ALDHDEHYDROG-RXN	EC-1.2.1.3	Orthology	Pantograph	Orthology-athaliana	Tiso gene 7322 Tiso gene 3513	PWY-7269
ALDOSE-1-EPIMERASE-RXN	EC-5.1.3.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation	Tiso gene 19779 Tiso gene 17734	PWY0-1466
ALPHAGALACTOSID-RXN	EC-3.2.1.22	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2588 Tiso gene 16101 Tiso gene 8673 Tiso gene 4615 Tiso gene 3392	PWY0-1301
AMACETOXID-RXN	EC-1.4.3.21	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 8756 Tiso gene 18325	THRDLCTCAT-PWY
AMINEPHEN-RXN	EC-1.4.3.21	Orthology	Pantograph	Orthology-athaliana Orthology-esiliculosus	Tiso gene 8756	2PHENDEG-PWY PWY-5751
ANTHRANSYN-RXN	EC-4.1.3.27	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 11176	TRPSYN-PWY PWY-5958 PWY-6661 PWY-6660
ARGINASE-RXN	EC-3.5.3.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4415	ARGASEDEG-PWY PWY-6922 ARG-PRO-PWY ARG-GLU-PWY PWY-4984 PWY-6305 CITRULBIO-PWY
ARGSUCCINLYA-RXN	EC-4.3.2.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 2485	PWY-4984 ARGSYN-PWY PWY-5154 ARGSYNBSUB-PWY PWY-4983 PWY-7400
ARGSUCCINSYN-RXN	EC-6.3.4.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 12592	PWY-5154 ARGSYN-PWY PWY-4984 ARGSYNBSUB-PWY PWY-4983 PWY-7400
ASNSYNB-RXN	EC-6.3.5.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 2973 Tiso gene 7495	ASPARAGINE-BIOSYNTHESIS
ASPAMINOTRANS-RXN	EC-2.6.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17809 Tiso gene 6815 Tiso gene 17718 Tiso gene 13538 Tiso gene 12889 Tiso gene 15680	PWY-5913 MALATE-ASPARTATE-SHUTTLE-PWY PWY-7383 ASPARTATE-DEG1-PWY ASPARTATESYN-PWY PWY-7117 GLUTDEG-PWY PWY-7115 ASPARAGINE-DEG1-PWY-1
ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN	EC-1.2.1.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 18603	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPARTATEKIN-RXN	EC-2.7.2.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 16097 Tiso gene 4345 Tiso gene 13809 Tiso gene 17057	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPCARBTRANS-RXN	EC-2.1.3.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13527	PWY-7790 PWY-7791 PWY-5686
ATPASE-RXN	EC-3.6.4.6 EC-3.6.1.3 EC-3.6.1.15	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Orthology-creinhardtii Annotation-experimental annotation	Tiso gene 79 Tiso gene 11754 Tiso gene 2450 Tiso gene 3754 Tiso gene 19350 Tiso gene 9234 Tiso gene 5825 Tiso gene 1181 Tiso gene 13738 Tiso gene 1984 Tiso gene 3580 Tiso gene 12088 Tiso gene 8601 Tiso gene 623 Tiso gene 570 Tiso gene 13211 Tiso gene 20353 Tiso gene 20581 Tiso gene 4157 Tiso gene 9423 Tiso gene 6599 Tiso gene 2924 Tiso gene 2798 Tiso gene 15351 Tiso gene 5527 Tiso gene 12148 Tiso gene 13325 Tiso gene 2452 Tiso gene 19098 Tiso gene 4693 Tiso gene 14646 Tiso gene 237 Tiso gene 17449 Tiso gene 11923 Tiso gene 16478 Tiso gene 567 Tiso gene 9541 Tiso gene 4692 Tiso gene 9659 Tiso gene 14227 Tiso gene 5005 Tiso gene 621 Tiso gene 13737 Tiso gene 18780 Tiso gene 1358 Tiso gene 1983 Tiso gene 4330 Tiso gene 4026 Tiso gene 13520 Tiso gene 7215 Tiso gene 10771 Tiso gene 12899 Tiso gene 13518 Tiso gene 1790 Tiso gene 4092 Tiso gene 2448 Tiso gene 5013 Tiso gene 1291 Tiso gene 195 Tiso gene 546 Tiso gene 4726 Tiso gene 17616 Tiso gene 1960 Tiso gene 250 Tiso gene 1360 Tiso gene 15465 Tiso gene 16915 Tiso gene 5014 Tiso gene 11155 Tiso gene 13268 Tiso gene 13409 Tiso gene 1672 Tiso gene 18443 Tiso gene 17751 Tiso gene 6592 Tiso gene 5004 Tiso gene 18105 Tiso gene 4192 Tiso gene 2897 Tiso gene 38 Tiso gene 8584 Tiso gene 11012 Tiso gene 1959 Tiso gene 14226 Tiso gene 9262 Tiso gene 8741 Tiso gene 1145 Tiso gene 6012 Tiso gene 8461 Tiso gene 7210 Tiso gene 5826 Tiso gene 1610 Tiso gene 15043 Tiso gene 873 Tiso gene 2451 Tiso gene 17675 Tiso gene 3581 Tiso gene 17201 Tiso gene 8295 Tiso gene 13681 Tiso gene 9959 Tiso gene 13521 Tiso gene 12618 Tiso gene 8950 Tiso gene 7979 Tiso gene 5166 Tiso gene 13264 Tiso gene 6820 Tiso gene 8164 Tiso gene 2206 Tiso gene 601 Tiso gene 18007 Tiso gene 10282 Tiso gene 9263 Tiso gene 10760 Tiso gene 11325 Tiso gene 2889 Tiso gene 9243 Tiso gene 8742 Tiso gene 253 Tiso gene 6838 Tiso gene 6181 Tiso gene 829 Tiso gene 15850 Tiso gene 1917 Tiso gene 14474 Tiso gene 4155 Tiso gene 10823 Tiso gene 6537 Tiso gene 4437 Tiso gene 199 Tiso gene 572 Tiso gene 1306 Tiso gene 1366 Tiso gene 10824 Tiso gene 9114 Tiso gene 7873 Tiso gene 674 Tiso gene 8860 Tiso gene 4595 Tiso gene 8949 Tiso gene 11098 Tiso gene 2447 Tiso gene 569 Tiso gene 11648 Tiso gene 6180 Tiso gene 5525 Tiso gene 10584 Tiso gene 1914 Tiso gene 12953 Tiso gene 2929 Tiso gene 8153 Tiso gene 10981 Tiso gene 5528 Tiso gene 9264 Tiso gene 6822 Tiso gene 4156 Tiso gene 7745 Tiso gene 14113 Tiso gene 9460 Tiso gene 2068 Tiso gene 13653 Tiso gene 5526 Tiso gene 1444 Tiso gene 1611 Tiso gene 1541 Tiso gene 2449 Tiso gene 12185 Tiso gene 5307 Tiso gene 6839 Tiso gene 14239 Tiso gene 14547 Tiso gene 3406 Tiso gene 11192 Tiso gene 20327 Tiso gene 538 Tiso gene 7387 Tiso gene 2631 Tiso gene 7123 Tiso gene 15988 Tiso gene 12149 Tiso gene 9926 Tiso gene 8859 Tiso gene 8763 Tiso gene 4091 Tiso gene 4436 Tiso gene 568 Tiso gene 11689 Tiso gene 5529 Tiso gene 4596 Tiso gene 10221 Tiso gene 14816 Tiso gene 1916 Tiso gene 13522 Tiso gene 9004 Tiso gene 6614
BIS5-ADENOSYL-TRIPHOSPHATASE-RXN	EC-3.6.1.29	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii	Tiso gene 11617 Tiso gene 20047 Tiso gene 8240 Tiso gene 5129
BRANCHED-CHAINAMINOTRANSFERILEU-RXN	EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14984 Tiso gene 17748 Tiso gene 18403	ILEUSYN-PWY ILEUDEG-PWY PWY-5108 PWY-5103 PWY-5101 PWY-5078 PWY-5104
CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN	EC-2.1.1.104	Orthology	Pantograph	Orthology-athaliana Orthology-esiliculosus	Tiso gene 10561 Tiso gene 14561	PWY-6792 PWY-1121 PWY-5710 PWY-7498 PWY-6039 PWY-7398 PWY-361
CDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 17271 Tiso gene 17272 Tiso gene 195 Tiso gene 9290 Tiso gene 18224	PWY-7205
CDPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 10617 Tiso gene 9916 Tiso gene 10138 Tiso gene 9915	PWY-7210 PWY-7198 PWY-6545 PWY0-166 PWY-7184
CHORISMATE-SYNTHASE-RXN	EC-4.2.3.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 9630	PWY-6163
CHORISMATEMUT-RXN	EC-5.4.99.5	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 5940	PHESYN PWY-6120 PWY-3462 PWY-3461 PWY-7626 TYRSYN PWY-6627
CYCLOARTENOL-SYNTHASE-RXN	EC-5.4.99.8	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 14526	PWY-7154 PWY-7155 PWY-6115 PWY-6109 PWY-2541 PWY-6098
CYSTEINE-AMINOTRANSFERASE-RXN	EC-2.6.1.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Orthology-creinhardtii	Tiso gene 17718 Tiso gene 6815	PWY-5329 PWY0-1534
CYTOCHROME-B5-REDUCTASE-RXN	EC-1.6.2.2	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation	Tiso gene 6189 Tiso gene 19905 Tiso gene 8773 Tiso gene 7152
DADPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 17271 Tiso gene 9290 Tiso gene 18224 Tiso gene 16529 Tiso gene 17272 Tiso gene 195	PWY-7220 PWY-7224 PWY-7227
DAHPSYN-RXN	EC-2.5.1.54	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 7372 Tiso gene 18937 Tiso gene 18975 Tiso gene 8935 Tiso gene 8934	PWY-6164
DAPASYN-RXN	EC-2.6.1.62	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 11635	PWY0-1507
DCDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 9290 Tiso gene 17271 Tiso gene 195 Tiso gene 17272 Tiso gene 18224	PWY-7210 PWY-7198 PWY-7184 PWY-7197 PWY0-166 PWY-6545
DCMP-DEAMINASE-RXN	EC-3.5.4.12	Orthology	Pantograph	Orthology-athaliana Orthology-esiliculosus	Tiso gene 2978	PWY-7210
DGDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 195 Tiso gene 17272 Tiso gene 17271 Tiso gene 16529 Tiso gene 18224 Tiso gene 9290	PWY-7222 PWY-7224 PWY-7226
DIAMINOPIMDECARB-RXN	EC-4.1.1.20	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 12041 Tiso gene 10737	PWY-5097 PWY-2942 DAPLYSINESYN-PWY PWY-2941
DIHYDROKAEMPFEROL-4-REDUCTASE-RXN	EC-1.1.1.219	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15272 Tiso gene 9504 Tiso gene 9503 Tiso gene 11016	PWY1F-823
DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN	EC-3.6.1	Orthology	Pantograph	Orthology-athaliana Orthology-synechocystis Orthology-esiliculosus	Tiso gene 6277 Tiso gene 13604 Tiso gene 2924 Tiso gene 17467 Tiso gene 8599 Tiso gene 4112 Tiso gene 3667 Tiso gene 43 Tiso gene 12636 Tiso gene 5713 Tiso gene 10760 Tiso gene 7067 Tiso gene 1142 Tiso gene 277 Tiso gene 17804 Tiso gene 2747 Tiso gene 2019 Tiso gene 10158 Tiso gene 16712 Tiso gene 14428 Tiso gene 8601 Tiso gene 6144 Tiso gene 11387 Tiso gene 19075 Tiso gene 6767 Tiso gene 13784 Tiso gene 10288 Tiso gene 1799 Tiso gene 12514 Tiso gene 15988 Tiso gene 18343 Tiso gene 13729 Tiso gene 15582 Tiso gene 3314 Tiso gene 4645 Tiso gene 13847 Tiso gene 8600 Tiso gene 16176	PWY-7539 PWY-6797 PWY-6147
DIHYDROXYISOVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-experimental annotation Orthology-athaliana Orthology-esiliculosus	Tiso gene 1563	VALSYN-PWY PWY-7111
DIHYDROXYMETVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 1563	PWY-5103 ILEUSYN-PWY PWY-5101 PWY-5104
DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN	EC-4.1.1.33	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4171	PWY-922 PWY-7391
DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN	EC-2.1.1.37	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-synechocystis Orthology-esiliculosus	Tiso gene 5540 Tiso gene 2359 Tiso gene 10467 Tiso gene 9438
DOLICHYLDIPHOSPHATASE-RXN	EC-3.6.1.43	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation	Tiso gene 13799
DTDPGLUCDEHYDRAT-RXN	EC-4.2.1.46	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 7329 Tiso gene 12394	PWY-7315 PWY-7316 DTDPRHAMSYN-PWY PWY-7301 PWY-7104 PWY-6953 PWY-7318 PWY-6942 PWY-7312 PWY-7814 PWY-7440 PWY-7657 PWY-6808 PWY-7413 PWY-6976 PWY-7688 PWY-6974 PWY-6973 PWY-3221 PWY-7414
DTDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 9290 Tiso gene 17271 Tiso gene 18224 Tiso gene 17272 Tiso gene 16529 Tiso gene 195	PWY-7210 PWY-7198 PWY-7184 PWY-7187 PWY-7197 PWY0-166 PWY-6545

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