Difference between revisions of "PWY-3121"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-853 RXN1G-853] == * direction: ** LEFT-TO-RIGHT * common name: ** cis,cis-delta11,29-3-oxo-C4...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-853 RXN1G-853] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxoacyl-synthase
+
** cis,cis-delta11,29-3-oxo-C48:2-[acyl-carrier protein] reductase
−
** polyketide_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.1.1.M9 EC-1.1.1.M9]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ACETYL-ACP]][c] '''=>''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[cis-cis-D11-29-3-oxo-C48-2-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[cis-cis-D11-29-3-hydroxyC48-2-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 an acetyl-[acp][c] '''=>''' 1 an acetoacetyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
+
** 1 H+[c] '''+''' 1 a cis,cis-delta11,29-3-oxo-C48:2-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a cis,cis-delta11,29-3-hydroxy C48:2-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19302]]
+
* [[Tiso_gene_13083]]
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14485]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5939]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15991]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5965]], fatty acid biosynthesis initiation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5965 PWY-5965]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''86''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
+
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[synechocystis]]
 
−
*** [[athaliana]]
 
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
−
* [[manual]]:
 
−
** [[primary_network]]
 
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[experimental_annotation]]
 
−
*** [[in-silico_annotation]]
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23902 P23902]
 
−
** [http://www.uniprot.org/uniprot/P0A6R0 P0A6R0]
 
−
** [http://www.uniprot.org/uniprot/P49327 P49327]
 
−
** [http://www.uniprot.org/uniprot/P43710 P43710]
 
−
** [http://www.uniprot.org/uniprot/Q9HYR2 Q9HYR2]
 
−
** [http://www.uniprot.org/uniprot/O67612 O67612]
 
−
** [http://www.uniprot.org/uniprot/P20582 P20582]
 
−
** [http://www.uniprot.org/uniprot/Q9JT63 Q9JT63]
 
−
** [http://www.uniprot.org/uniprot/Q9JW56 Q9JW56]
 
−
** [http://www.uniprot.org/uniprot/Q9PMZ6 Q9PMZ6]
 
−
** [http://www.uniprot.org/uniprot/P43711 P43711]
 
−
** [http://www.uniprot.org/uniprot/O25284 O25284]
 
−
** [http://www.uniprot.org/uniprot/Q9JX65 Q9JX65]
 
−
** [http://www.uniprot.org/uniprot/O34340 O34340]
 
−
** [http://www.uniprot.org/uniprot/Q9PI63 Q9PI63]
 
−
** [http://www.uniprot.org/uniprot/P0AAI5 P0AAI5]
 
−
** [http://www.uniprot.org/uniprot/Q07510 Q07510]
 
−
** [http://www.uniprot.org/uniprot/Q06097 Q06097]
 
−
** [http://www.uniprot.org/uniprot/P41175 P41175]
 
−
** [http://www.uniprot.org/uniprot/P31176 P31176]
 
−
** [http://www.uniprot.org/uniprot/Q40027 Q40027]
 
−
** [http://www.uniprot.org/uniprot/Q40028 Q40028]
 
−
** [http://www.uniprot.org/uniprot/P73283 P73283]
 
−
** [http://www.uniprot.org/uniprot/P0A953 P0A953]
 
−
** [http://www.uniprot.org/uniprot/O64485 O64485]
 
−
** [http://www.uniprot.org/uniprot/O65677 O65677]
 
−
** [http://www.uniprot.org/uniprot/Q39310 Q39310]
 
−
** [http://www.uniprot.org/uniprot/O23738 O23738]
 
−
** [http://www.uniprot.org/uniprot/Q41134 Q41134]
 
−
** [http://www.uniprot.org/uniprot/Q41135 Q41135]
 
−
** [http://www.uniprot.org/uniprot/Q54208 Q54208]
 
−
** [http://www.uniprot.org/uniprot/O54440 O54440]
 
−
** [http://www.uniprot.org/uniprot/P55338 P55338]
 
−
** [http://www.uniprot.org/uniprot/Q9RA31 Q9RA31]
 
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
 
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: common name=cis,cis-delta11,29-3-oxo-C48:2-[acyl-carrier protein] reductase}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: ec number=EC-1.1.1.M9}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: gene associated=Tiso_gene_13083}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_136|Tiso_gene_14485|Tiso_gene_13394|Tiso_gene_5939|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_15991}}
+
−
{{#set: in pathway=PWY-5965|PWY-5966|FASYN-INITIAL-PWY|PWY-7388}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
+
{{#set: reconstruction source=esiliculosus}}
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:06, 10 January 2018

Reaction RXN1G-853

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cis,cis-delta11,29-3-oxo-C48:2-[acyl-carrier protein] reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"cis,cis-delta11,29-3-oxo-C48:2-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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