Difference between revisions of "Tiso gene 3462"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] == * smiles: *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy....")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
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* smiles:
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* direction:
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** C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M
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** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
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* common name:
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** 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
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* molecular weight:
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** 312.196   
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* Synonym(s):
 
* Synonym(s):
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** 5-phosphoribosyl-N-formylglycineamidine
 
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** 5'-phosphoribosyl-N-formyl glycineamidine
 
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** FGAM
 
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** 5'-phosphoribosylformylglycinamidine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[AIRS-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
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* [[FGAMSYN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-methionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1602]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C04640 C04640]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18413 18413]
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** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
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* BIGG : fpram
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P25665 P25665]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657386 90657386]
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** [http://www.uniprot.org/uniprot/P45331 P45331]
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* HMDB : HMDB06211
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** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
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{{#set: smiles=C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)}}
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** [http://www.uniprot.org/uniprot/O26869 O26869]
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{{#set: inchi key=InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M}}
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** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
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{{#set: common name=2-(formamido)-N1-(5-phospho-&beta;-D-ribosyl)acetamidine}}
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** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
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{{#set: molecular weight=312.196    }}
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** [http://www.uniprot.org/uniprot/P05694 P05694]
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{{#set: common name=5-phosphoribosyl-N-formylglycineamidine|5'-phosphoribosyl-N-formyl glycineamidine|FGAM|5'-phosphoribosylformylglycinamidine}}
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** [http://www.uniprot.org/uniprot/Q42699 Q42699]
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{{#set: consumed by=AIRS-RXN}}
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** [http://www.uniprot.org/uniprot/Q39586 Q39586]
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{{#set: produced by=FGAMSYN-RXN}}
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** [http://www.uniprot.org/uniprot/O48613 O48613]
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** [http://www.uniprot.org/uniprot/P93263 P93263]
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** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.1.1.14}}
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{{#set: gene associated=Tiso_gene_1602}}
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{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-702|HSERMETANA-PWY|PWY-6151|PWY-5041}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:50, 10 January 2018

Reaction HOMOCYSMET-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] + 1 L-homocysteine[c] <=> 1 tetrahydropteroyl tri-L-glutamate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II: PWY-702
    • 5 reactions found over 6 reactions in the full pathway
  • HSERMETANA-PWY, L-methionine biosynthesis III: HSERMETANA-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3462&oldid=14850"