Difference between revisions of "CPD-18390"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** aldo-ket...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** ORF
+
** aerobic respiration III (alternative oxidase pathway)
−
** aldo-keto_reductase_family_4_member_c9_isoform_x2
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** alternative oxidase pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[AMMONIUM]][c]
+
* [[NADH-DEHYDROG-A-RXN]]
−
* With common name(s):
+
** 18 associated gene(s):
−
** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 inosine[c] '''+''' 1 ammonium[c]
+
*** [[Tiso_gene_10326]]
−
 
+
*** [[Tiso_gene_18831]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_4894]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_9874]]
−
* [[Tiso_gene_18322]]
+
*** [[Tiso_gene_18172]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_18339]]
−
***EC-NUMBER
+
*** [[Tiso_gene_19691]]
−
* [[Tiso_gene_19373]]
+
*** [[Tiso_gene_2949]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_4836]]
−
***EC-NUMBER
+
*** [[Tiso_gene_17199]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_5171]]
−
== Pathways  ==
+
*** [[Tiso_gene_18707]]
−
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
+
*** [[Tiso_gene_359]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
*** [[Tiso_gene_3113]]
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
+
*** [[Tiso_gene_13075]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
*** [[Tiso_gene_355]]
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
*** [[Tiso_gene_358]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
*** [[Tiso_gene_15276]]
−
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
+
** 4 reconstruction source(s) associated:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
*** [[annotation-experimental_annotation]]
−
== Reconstruction information  ==
+
*** [[manual-primary_network]]
−
* [[orthology]]:
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]:
+
*** [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
* [[RXN-6883]]
−
* [[annotation]]:
+
** 4 associated gene(s):
−
** [[pathwaytools]]:
+
*** [[Tiso_gene_7486]]
−
*** [[in-silico_annotation]]
+
*** [[Tiso_gene_17130]]
 +
*** [[Tiso_gene_7953]]
 +
*** [[Tiso_gene_8278]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ARACYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4302 PWY-4302]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33682}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
+
{{#set: taxonomic range=TAX-4751}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-33090}}
−
** [http://www.uniprot.org/uniprot/P22333 P22333]
+
{{#set: common name=aerobic respiration III (alternative oxidase pathway)}}
−
** [http://www.uniprot.org/uniprot/P00813 P00813]
+
{{#set: common name=alternative oxidase pathway}}
−
** [http://www.uniprot.org/uniprot/P03958 P03958]
+
{{#set: reaction found=3}}
−
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
+
{{#set: total reaction=3}}
−
** [http://www.uniprot.org/uniprot/P55266 P55266]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/P53984 P53984]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
+
−
{{#set: ec number=EC-3.5.4.4}}
+
−
{{#set: gene associated=Tiso_gene_18322|Tiso_gene_19373}}
+
−
{{#set: in pathway=PWY-6609|PWY0-1296|SALVADEHYPOX-PWY|PWY-6611}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:27, 18 March 2018

Pathway PWY-4302

  • taxonomic range:
  • common name:
    • aerobic respiration III (alternative oxidase pathway)
  • Synonym(s):
    • alternative oxidase pathway

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-18390&oldid=24538"