Difference between revisions of "Tiso gene 7852"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] == * direction: ** REVERSIBLE * common name: ** acyl-coenzyme_a_oxidase ** ORF...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9929 RXN-9929] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** acyl-coenzyme_a_oxidase
 +
** ORF
 +
** acyl-_dehydrogenase
 +
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.98.1 EC-1.3.98.1]
+
** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[FUM]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[SUC]][c]
+
** 1 [[Medium-Chain-234-Saturated-acyl-CoAs]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[medium-Chain-Trans-23-Dehydroacyl-CoA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-dihydroorotate[c] '''+''' 1 fumarate[c] '''=>''' 1 orotate[c] '''+''' 1 succinate[c]
+
** 1 a medium-chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a medium-chain trans-2,3-dehydroacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5280]]
+
* [[Tiso_gene_6475]]
−
** [[pantograph]]-[[synechocystis]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16631]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17967]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_18566]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5991]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_883]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
−
* LIGAND-RXN:
+
{{#set: common name=ORF}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
+
{{#set: common name=acyl-_dehydrogenase}}
−
* UNIPROT:
+
{{#set: common name=acyl-CoA_dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/P74782 P74782]
+
{{#set: ec number=EC-1.3.8.7}}
−
** [http://www.uniprot.org/uniprot/Q63707 Q63707]
+
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_16631|Tiso_gene_17967|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_883}}
−
** [http://www.uniprot.org/uniprot/Q48240 Q48240]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P32746 P32746]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q02127 Q02127]
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
** [http://www.uniprot.org/uniprot/P32748 P32748]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P28294 P28294]
+
−
** [http://www.uniprot.org/uniprot/P28272 P28272]
+
−
** [http://www.uniprot.org/uniprot/P46539 P46539]
+
−
** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
+
−
** [http://www.uniprot.org/uniprot/P25996 P25996]
+
−
** [http://www.uniprot.org/uniprot/Q58070 Q58070]
+
−
** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
+
−
** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
+
−
** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
+
−
** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
+
−
** [http://www.uniprot.org/uniprot/P45477 P45477]
+
−
** [http://www.uniprot.org/uniprot/P32747 P32747]
+
−
** [http://www.uniprot.org/uniprot/P07670 P07670]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-1.3.98.1}}
+
−
{{#set: gene associated=Tiso_gene_5280}}
+
−
{{#set: in pathway=PWY-7790}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+

Revision as of 19:30, 18 March 2018

Reaction RXN-11734

  • direction:
    • REVERSIBLE
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7852&oldid=24861"