Difference between revisions of "CPD-560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14177 RXN-14177] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-560 CPD-560] == * smiles: ** CSCC1(OC(C(C1O)O)O) * inchi key: ** InChIKey=OLVVOVIFTBSBBH-JD...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14177 RXN-14177] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-560 CPD-560] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CSCC1(OC(C(C1O)O)O)
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.1.1.163 EC-2.1.1.163]
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** InChIKey=OLVVOVIFTBSBBH-JDJSBBGDSA-N
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* common name:
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** S-methyl-5-thio-D-ribose
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* molecular weight:
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** 180.218   
 
* Synonym(s):
 
* Synonym(s):
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** 5-methylthio-D-ribose
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** MTR
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** 5-methylthioribose
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** S-methyl-5-thio-D-ribofuranose
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[M5TRK]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-15152]][c] '''=>''' 1 [[CPD-15153]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone[c] '''=>''' 1 3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9109]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_12366]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_20504]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_17244]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_13355]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_19352]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* METABOLIGHTS : MTBLC16895
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26465 26465]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10313378 10313378]
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{{#set: ec number=EC-2.1.1.163}}
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* HMDB : HMDB01087
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{{#set: gene associated=Tiso_gene_9109|Tiso_gene_12366|Tiso_gene_20504|Tiso_gene_17244|Tiso_gene_13355|Tiso_gene_19352}}
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* LIGAND-CPD:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03089 C03089]
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{{#set: reconstruction category=orthology}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.chemspider.com/Chemical-Structure.8488843.html 8488843]
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{{#set: reconstruction source=athaliana}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=78440 78440]
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* BIGG : 5mtr
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{{#set: smiles=CSCC1(OC(C(C1O)O)O)}}
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{{#set: inchi key=InChIKey=OLVVOVIFTBSBBH-JDJSBBGDSA-N}}
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{{#set: common name=S-methyl-5-thio-D-ribose}}
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{{#set: molecular weight=180.218    }}
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{{#set: common name=5-methylthio-D-ribose|MTR|5-methylthioribose|S-methyl-5-thio-D-ribofuranose}}
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{{#set: consumed by=M5TRK}}
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{{#set: produced by=METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN}}

Revision as of 18:43, 18 March 2018

Metabolite CPD-560

  • smiles:
    • CSCC1(OC(C(C1O)O)O)
  • inchi key:
    • InChIKey=OLVVOVIFTBSBBH-JDJSBBGDSA-N
  • common name:
    • S-methyl-5-thio-D-ribose
  • molecular weight:
    • 180.218
  • Synonym(s):
    • 5-methylthio-D-ribose
    • MTR
    • 5-methylthioribose
    • S-methyl-5-thio-D-ribofuranose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-560&oldid=26426"