Difference between revisions of "CPD-31"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11060 RXN-11060] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin_family_protein *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-170 CPD-170] == * smiles: ** C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11060 RXN-11060] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-170 CPD-170] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(OC2(CO)(C(O)C(O)C(CO)O2))O3))O4))
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* inchi key:
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** InChIKey=UQZIYBXSHAGNOE-XNSRJBNMSA-N
 
* common name:
 
* common name:
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** exostosin_family_protein
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** stachyose
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.1.17 EC-2.4.1.17]
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** 666.583   
 
* Synonym(s):
 
* Synonym(s):
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** (2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
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** α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-11501]]
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** 1 [[N-ACETYL-SEROTONIN]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CPD-12016]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 N-acetyl-serotonin[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 N-acetyl-serotonin glucuronide[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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* [[2.4.1.67-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14140]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14141]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 10094-58-3
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{{#set: common name=exostosin_family_protein}}
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* PUBCHEM:
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{{#set: ec number=EC-2.4.1.17}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439531 439531]
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{{#set: gene associated=Tiso_gene_14140|Tiso_gene_14141}}
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* KEGG-GLYCAN : G00278
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{{#set: in pathway=PWY-6398}}
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* HMDB : HMDB03553
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{{#set: reconstruction category=annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01613 C01613]
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{{#set: reconstruction source=in-silico_annotation}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.388624.html 388624]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17164 17164]
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{{#set: smiles=C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(OC2(CO)(C(O)C(O)C(CO)O2))O3))O4))}}
 +
{{#set: inchi key=InChIKey=UQZIYBXSHAGNOE-XNSRJBNMSA-N}}
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{{#set: common name=stachyose}}
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{{#set: molecular weight=666.583    }}
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{{#set: common name=(2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol|α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf}}
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{{#set: consumed by=RXN-11501}}
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{{#set: reversible reaction associated=2.4.1.67-RXN}}

Revision as of 18:48, 18 March 2018

Metabolite CPD-170

  • smiles:
    • C(O)C1(C(O)C(O)C(O)C(O1)OCC4(C(O)C(O)C(O)C(OCC3(C(O)C(O)C(O)C(OC2(CO)(C(O)C(O)C(CO)O2))O3))O4))
  • inchi key:
    • InChIKey=UQZIYBXSHAGNOE-XNSRJBNMSA-N
  • common name:
    • stachyose
  • molecular weight:
    • 666.583
  • Synonym(s):
    • (2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
    • α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 10094-58-3
  • PUBCHEM:
  • KEGG-GLYCAN : G00278
  • HMDB : HMDB03553
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:



{{#set: common name=(2R,3R,4S,5S,6R)-2-[[(2R,3S,4S,5R,6R)-6-[(2R,3R,4S,5R,6R)-6-[(2S,3S,4R,5S)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol|α-D-Galp-(1->6)-α-D-Galp-(1->6)-α-D-Glcp-(1->2)-β-D-Fruf}}


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