Difference between revisions of "Tiso gene 10649"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICONUCADENYLYLTRAN-RXN NICONUCADENYLYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXY-METHYL-BUTENYL-DIP HYDROXY-METHYL-BUTENYL-DIP] == * smiles: ** CC(CO)=CCOP(OP([O-])(=O)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICONUCADENYLYLTRAN-RXN NICONUCADENYLYLTRAN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HYDROXY-METHYL-BUTENYL-DIP HYDROXY-METHYL-BUTENYL-DIP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-]
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* inchi key:
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** InChIKey=MDSIZRKJVDMQOQ-GORDUTHDSA-K
 
* common name:
 
* common name:
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** Probable nicotinate-nucleotide adenylyltransferase
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** (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.7.18 EC-2.7.7.18]
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** 259.069   
 
* Synonym(s):
 
* Synonym(s):
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** (E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate
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** HMBDP
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** 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[ISPH2-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[PPI]][c]
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* [[RXN0-884]]
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* With common name(s):
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* [[IDS2]]
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** 1 H+[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 ATP[c] '''=>''' 1 nicotinate adenine dinucleotide[c] '''+''' 1 diphosphate[c]
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* [[R07219]]
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* [[IDS1]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN0-882]]
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* [[Tiso_gene_6231]]
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* [[RXN-15878]]
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** EXPERIMENTAL_ANNOTATION
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== Reaction(s) of unknown directionality ==
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***AUTOMATED-NAME-MATCH
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* [[HDS]]
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== Pathways  ==
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* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22860 22860]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21597501 21597501]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R03005 R03005]
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** [http://www.chemspider.com/Chemical-Structure.10224038.html 10224038]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=Probable nicotinate-nucleotide adenylyltransferase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=128753 128753]
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{{#set: ec number=EC-2.7.7.18}}
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* BIGG : h2mb4p
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{{#set: gene associated=Tiso_gene_6231}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-5381|PYRIDNUCSAL-PWY|PYRIDNUCSYN-PWY|PWY-7761|PWY-5653}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11811 C11811]
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-]}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=MDSIZRKJVDMQOQ-GORDUTHDSA-K}}
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{{#set: reconstruction source=experimental_annotation}}
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{{#set: common name=(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate}}
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{{#set: molecular weight=259.069    }}
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{{#set: common name=(E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate|HMBDP|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate}}
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{{#set: consumed by=ISPH2-RXN|RXN0-884|IDS2|R07219|IDS1}}
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{{#set: produced by=RXN0-882|RXN-15878}}
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{{#set: reversible reaction associated=HDS}}

Revision as of 18:56, 18 March 2018

Metabolite HYDROXY-METHYL-BUTENYL-DIP

  • smiles:
    • CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-]
  • inchi key:
    • InChIKey=MDSIZRKJVDMQOQ-GORDUTHDSA-K
  • common name:
    • (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
  • molecular weight:
    • 259.069
  • Synonym(s):
    • (E)-4-hydroxy-3-methylbut 2-en-1-yl diphosphate
    • HMBDP
    • 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(CO)=CCOP(OP([O-])(=O)[O-])(=O)[O-" cannot be used as a page name in this wiki.




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