Difference between revisions of "1.2.1.65-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
(Created page with "Category:Gene == Gene Tiso_gene_18793 == * right end position: ** 2084 * transcription direction: ** POSITIVE * left end position: ** 1018 * centisome position: ** 36.4352...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] ==
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== Gene Tiso_gene_18793 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 2084
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* common name:
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* transcription direction:
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** stearate biosynthesis III (fungi)
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** POSITIVE
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* left end position:
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** 1018
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* centisome position:
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** 36.43522   
 
* Synonym(s):
 
* Synonym(s):
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** fatty acid biosynthesis
 
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** stearic acid biosynthesis
 
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** octadecanoate biosynthesis
 
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** saturated fatty acid biosynthesis
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[DCTP-PYROPHOSPHATASE-RXN]]
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* [[RXN-9624]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_7477]]
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* Reaction: [[DGTD]]
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*** [[Tiso_gene_801]]
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** Source: [[orthology-creinhardtii]]
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** 3 reconstruction source(s) associated:
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* Reaction: [[DUTNH]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-athaliana]]
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* Reaction: [[DUTP-PYROP-RXN]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-9633]]
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*** Assignment: ec-number
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** 7 associated gene(s):
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_13083]]
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* Reaction: [[ITPP]]
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*** [[Tiso_gene_10876]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_136]]
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* Reaction: [[NTDP]]
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*** [[Tiso_gene_9885]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_135]]
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* Reaction: [[NTPD]]
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*** [[Tiso_gene_500]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_13394]]
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* Reaction: [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]]
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** 4 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-14139]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[RXN-9634]]
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** Source: [[orthology-athaliana]]
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** 6 associated gene(s):
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* Reaction: [[RXN-14140]]
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*** [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_135]]
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*** Assignment: ec-number
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*** [[Tiso_gene_136]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_13394]]
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* Reaction: [[RXN0-1602]]
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*** [[Tiso_gene_6884]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_10876]]
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** Source: [[orthology-esiliculosus]]
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** 3 reconstruction source(s) associated:
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* Reaction: [[RXN0-1603]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[manual-primary_network]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[RXN0-383]]
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* [[RXN3O-1803]]
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** Source: [[annotation-in-silico_annotation]]
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** 9 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_135]]
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* Reaction: [[RXN0-384]]
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*** [[Tiso_gene_5939]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10876]]
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*** Assignment: ec-number
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*** [[Tiso_gene_13394]]
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* Reaction: [[RXN0-385]]
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*** [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_15991]]
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*** Assignment: ec-number
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*** [[Tiso_gene_14485]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_19302]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_500]]
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* Reaction: [[RXN0-5107]]
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** 6 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN0-6382]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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** Source: [[orthology-athaliana]]
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*** [[manual-primary_network]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN3O-5293]]
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* Reaction: [[UTPPH]]
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** 5 associated gene(s):
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_10876]]
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== Pathways associated ==
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*** [[Tiso_gene_136]]
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* [[PWY-7206]]
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*** [[Tiso_gene_500]]
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* [[PWY-7184]]
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*** [[Tiso_gene_135]]
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* [[PWY-7187]]
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*** [[Tiso_gene_13394]]
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* [[PWY-7821]]
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** 1 reconstruction source(s) associated:
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* [[PWY0-166]]
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6545]]
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* [[RXN3O-5304]]
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** 5 associated gene(s):
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_500]]
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−
*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_10876]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=2084}}
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{{#set: common name=stearate biosynthesis III (fungi)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=fatty acid biosynthesis|stearic acid biosynthesis|octadecanoate biosynthesis|saturated fatty acid biosynthesis}}
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{{#set: left end position=1018}}
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{{#set: reaction found=6}}
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{{#set: centisome position=36.43522    }}
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{{#set: total reaction=6}}
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{{#set: reaction associated=DCTP-PYROPHOSPHATASE-RXN|DGTD|DUTNH|DUTP-PYROP-RXN|ITPP|NTDP|NTPD|NUCLEOTIDE-PYROPHOSPHATASE-RXN|RXN-14139|RXN-14140|RXN0-1602|RXN0-1603|RXN0-383|RXN0-384|RXN0-385|RXN0-5107|RXN0-6382|UTPPH}}
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{{#set: completion rate=100.0}}
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{{#set: pathway associated=PWY-7206|PWY-7184|PWY-7187|PWY-7821|PWY0-166|PWY-6545}}

Revision as of 14:51, 21 March 2018

Gene Tiso_gene_18793

  • right end position:
    • 2084
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1018
  • centisome position:
    • 36.43522
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.2.1.65-RXN&oldid=30684"