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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] == | + | == Gene Tiso_gene_7843 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** indole3-glycerol_phosphate_synthase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.1.1.48 EC-4.1.1.48]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[PROTEIN-KINASE-RXN]] |
| − | ** 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[INDOLE-3-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] '''+''' 1 H2O[c] '''+''' 1 CO2[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_4521]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_18384]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_10298]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_10297]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
| + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | ** Source: [[orthology-esiliculosus]] | | ** Source: [[orthology-esiliculosus]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=PROTEIN-KINASE-RXN}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23476 23476]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03508 R03508]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P42393 P42393]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20577 P20577]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P18304 P18304]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q06121 Q06121]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9V1G3 Q9V1G3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20578 P20578]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PI11 Q9PI11]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58328 Q58328]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JSN4 Q9JSN4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P03964 P03964]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00910 P00910]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00909 P00909]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00911 P00911]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17217 P17217]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20409 P20409]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00937 P00937]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00908 P00908]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05328 P05328]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P06531 P06531]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P18483 P18483]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25170 P25170]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P26938 P26938]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24773 P24773]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q01999 Q01999]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9YGB5 Q9YGB5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9S591 Q9S591]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X7C7 Q9X7C7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q92370 Q92370]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P94327 P94327]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=indole3-glycerol_phosphate_synthase}}
| + | |
| − | {{#set: ec number=EC-4.1.1.48}}
| + | |
| − | {{#set: gene associated=Tiso_gene_4521|Tiso_gene_18384|Tiso_gene_10298|Tiso_gene_10297}}
| + | |
| − | {{#set: in pathway=TRPSYN-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
