Difference between revisions of "3.4.11.5-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10655 RXN-10655] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
(Created page with "Category:Gene == Gene Tiso_gene_6190 == * right end position: ** 6596 * transcription direction: ** POSITIVE * left end position: ** 5511 * centisome position: ** 44.24729...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10655 RXN-10655] ==
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== Gene Tiso_gene_6190 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6596
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* common name:
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* transcription direction:
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** 3-oxoacyl-(acyl-carrier-protein)
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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** 5511
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* centisome position:
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** 44.24729   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BTUR2-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-oxo-cis-D7-tetradecenoyl-ACPs]][c] '''=>''' 1 [[3-hydroxy-cis-D7-tetraecenoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-cis-Δ7-tetradecenoyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxy cis Δ7-tetradecenoyl-[acp][c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13083]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[COBALADENOSYLTRANS-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[R344-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[COBALSYN-PWY]]
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* [[PWY-6269]]
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* [[PWY-6268]]
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* [[PWY-5509]]
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* [[PWY-5508]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6596}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: left end position=5511}}
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{{#set: gene associated=Tiso_gene_13083|Tiso_gene_9885}}
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{{#set: centisome position=44.24729    }}
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{{#set: in pathway=PWY-6282}}
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{{#set: reaction associated=BTUR2-RXN|COBALADENOSYLTRANS-RXN|R344-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=COBALSYN-PWY|PWY-6269|PWY-6268|PWY-5509|PWY-5508}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:45, 21 March 2018

Gene Tiso_gene_6190

  • right end position:
    • 6596
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5511
  • centisome position:
    • 44.24729
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.4.11.5-RXN&oldid=36076"