Difference between revisions of "Tiso gene 13724"

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(Created page with "Category:Gene == Gene Tiso_gene_19667 == * left end position: ** 329 * transcription direction: ** POSITIVE * right end position: ** 1772 * centisome position: ** 15.49693...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** CrtZ == Reaction Formula == *...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19667 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] ==
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* left end position:
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* direction:
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** 329
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** LEFT-TO-RIGHT
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* transcription direction:
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** POSITIVE
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* right end position:
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** 1772
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* centisome position:
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** 15.496938   
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* Synonym(s):
 
* Synonym(s):
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** CrtZ
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-7409]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 oxygen[c] '''+''' 1 NADH[c] '''+''' 1 β-cryptoxanthin[c] '''+''' 1 H+[c] '''=>''' 1 zeaxanthin[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10837]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=329}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
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{{#set: right end position=1772}}
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* LIGAND-RXN:
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{{#set: centisome position=15.496938    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=CrtZ}}
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{{#set: gene associated=Tiso_gene_10837}}
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{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:51, 21 March 2018

Reaction RXN-8026

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • CrtZ

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae): PWY-5288
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis: PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis): PWY-7638
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13724&oldid=36746"